DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or1a and Or33a

DIOPT Version :9

Sequence 1:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_523553.1 Gene:Or33a / 34601 FlyBaseID:FBgn0026392 Length:378 Species:Drosophila melanogaster


Alignment Length:371 Identity:76/371 - (20%)
Similarity:135/371 - (36%) Gaps:95/371 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SPLLYC---IMCLTTSFELCTVCAFMVQNRNQIVLCSEALMHGLQMVSSLLKMAIFLAKSHDLVD 98
            |..|:|   ..|.....:.......::|:.:..|...|...:..|..|.:.:|   |:||: ||.
  Fly    71 SECLFCSYKFFCFRWKLKEIKTIEGLLQDLDSRVESEEERNYFNQNPSRVARM---LSKSY-LVA 131

  Fly    99 LIQQIQSP------FTEEDLVGTEWRSQNQRGQLMAAIYFMMCAGTSVSFLLMPVALTMLKYHST 157
            .|..|.:.      .|..:|:...|...:  .|..||||::     |.|:..:..:|.:|:..:.
  Fly   132 AISAIITATVAGLFSTGRNLMYLGWFPYD--FQATAAIYWI-----SFSYQAIGSSLLILENLAN 189

  Fly   158 GEFAPVSSFRVLLPYDVTQPHVYAMDCCLMVFVLSFFCCSTTGVDTLYGWCALGVSLQYRRLGQQ 222
            ..:.|::       :.|...||.     |::..||                         |:|..
  Fly   190 DSYPPIT-------FCVVSGHVR-----LLIMRLS-------------------------RIGHD 217

  Fly   223 LKRIPSCFNPSRSDFGLSGIFVEHARLLKIVQHFNYSFMEIAFVEVVIICGLYCSVICQYIMPHT 287
            :| :.|..|..:...|:.    :|.:|:||::... |.:.::.:...:..|:..|:....|:...
  Fly   218 VK-LSSSENTRKLIEGIQ----DHRKLMKIIRLLR-STLHLSQLGQFLSSGINISITLINILFFA 276

  Fly   288 NQNFAFL---GFFS--LVVTTQLCIYLFGAEQVRLEAERFSRLLYEVIP--WQNLPPKHRK---- 341
            ..|||.|   .||:  |:.....|.|..      |....|.:|.|.:..  |..:..::.:    
  Fly   277 ENNFAMLYYAVFFAAMLIELFPSCYYGI------LMTMEFDKLPYAIFSSNWLKMDKRYNRSLII 335

  Fly   342 ---LFLFPIERAQRETV---LGAYFFELGRPLLVWIFRTAGSFTTL 381
               |.|.|:.......|   :.|:|..:         |.|.||.||
  Fly   336 LMQLTLVPVNIKAGGIVGIDMSAFFATV---------RMAYSFYTL 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 63/319 (20%)
Or33aNP_523553.1 7tm_6 61..367 CDD:251636 71/364 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465636
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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