DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or1a and Or22a

DIOPT Version :9

Sequence 1:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_523453.1 Gene:Or22a / 33335 FlyBaseID:FBgn0026398 Length:397 Species:Drosophila melanogaster


Alignment Length:318 Identity:64/318 - (20%)
Similarity:113/318 - (35%) Gaps:80/318 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 GLQMVSSLLKMAIFL---AKSHDLVDLIQQIQSPFTEEDLVGTEWRSQNQR----GQLMAAIYFM 133
            |:.|..|..|.|..|   .|..:...|:.|:     ::..:..:.||...|    |.....:|.:
  Fly    90 GVNMYGSSFKCAFTLIGFKKRQEAKVLLDQL-----DKRCLSDKERSTVHRYVAMGNFFDILYHI 149

  Fly   134 MCAGTSVSFLLMPVALTMLKYHSTGEFAPVSSFRVLLPYDVTQPHVY---AMDCCLMVFVLSFFC 195
            ..:    :|::|.....:|:..        .::|:..||..:....|   ..:|.||...:....
  Fly   150 FYS----TFVVMNFPYFLLERR--------HAWRMYFPYIDSDEQFYISSIAECFLMTEAIYMDL 202

  Fly   196 CSTTGVDTLYGWCALGVSLQYRR-----LGQQLKRIPSCFNPSRSD----FGLSGIFVEHARLLK 251
            |:..        |.| :|:...|     |.|:|:.:.|  .|.|::    ..|:....:|..||.
  Fly   203 CTDV--------CPL-ISMLMARCHISLLKQRLRNLRS--KPGRTEDEYLEELTECIRDHRLLLD 256

  Fly   252 IVQHFNYSFMEIAFVEVVII---CGLYCSVICQYIMPHTNQNFAFLGFFSLVVTTQLCIYLFGAE 313
            .|......|....||:.::|   .||  |:|          |..|...|...|.|  |:::|   
  Fly   257 YVDALRPVFSGTIFVQFLLIGTVLGL--SMI----------NLMFFSTFWTGVAT--CLFMF--- 304

  Fly   314 QVRLEAERFSRLLYEVI-------------PWQNLPPKHRKLFLFPIERAQRETVLGA 358
            .|.:|...|..|...:|             .|.:...:::...::.:...|:...|.|
  Fly   305 DVSMETFPFCYLCNMIIDDCQEMSNCLFQSDWTSADRRYKSTLVYFLHNLQQPITLTA 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 63/315 (20%)
Or22aNP_523453.1 7tm_6 81..381 CDD:251636 64/318 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465648
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.