DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or1a and Or65a

DIOPT Version :9

Sequence 1:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_729161.1 Gene:Or65a / 318011 FlyBaseID:FBgn0041625 Length:417 Species:Drosophila melanogaster


Alignment Length:351 Identity:71/351 - (20%)
Similarity:131/351 - (37%) Gaps:75/351 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SFELCTVCAFMV----QNRNQIVLCSEALMHGLQMVSSLLKMAIFLAKSHDL---VDLIQ----- 101
            |.:|.|..|.:.    ::...||.....|:..:.::....::..|...:.:|   :|.::     
  Fly    71 SIQLATALASLFYGISESIGDIVNLGRDLVFIITIIFICFRLVFFAQYAGELDVIIDALEDIYHW 135

  Fly   102 QIQSPFTEEDLVGTEWRSQNQRGQLMAAIYFMMCAGTSVSFLLMPVALTMLKYHST-----GEFA 161
            .|:.|.|:|          .|..:.:..:.||....|..|||:    |.||...||     .:..
  Fly   136 SIKGPATKE----------VQETKRLHFLLFMALIITWFSFLI----LFMLIKISTPFWIESQTL 186

  Fly   162 PVSSFRVLLPYDVTQPHVYAMDCCLMVFVLSFFCCSTTGVDTLYGWCA----LGVSLQY------ 216
            |   |.|..|:.:..|..:.     :.:::.|...|||.:..|. |..    :||||.:      
  Fly   187 P---FHVSWPFQLHDPSKHP-----IAYIIIFVSQSTTMLYFLI-WLGVVENMGVSLFFELTSAL 242

  Fly   217 RRLGQQLKRIPS-CFNPSRSDFGLSGIFVEHARLLKIVQH-----------FNYSFMEIAFVEVV 269
            |.|..:|:.:.. |....      ..::.|..|:.|..|.           ||.:|:....:..:
  Fly   243 RVLCIELRNLQELCLGDE------DMLYRELCRMTKFHQQIILLTDRCNHIFNGAFIMQMLINFL 301

  Fly   270 IICGLYCSVICQYIMPHTNQNFAFLGFFSLVVTTQLCIYLFGAEQVRLEAERFSRLLYEVIPWQN 334
            ::......|:.....|.....:..:   .|:....|..:....:....|:|:.:..:||... .|
  Fly   302 LVSLSLFEVLAAKKNPQVAVEYMII---MLMTLGHLSFWSKFGDMFSKESEQVALAVYEAYD-PN 362

  Fly   335 LPPK--HRKLFLFPIERAQRETVLGA 358
            :..|  ||: |.|.|:|||:..::.|
  Fly   363 VGSKSIHRQ-FCFFIQRAQKPLIMKA 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 64/317 (20%)
Or65aNP_729161.1 7tm_6 145..406 CDD:251636 57/267 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465089
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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