DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or1a and LOC1277251

DIOPT Version :10

Sequence 1:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster
Sequence 2:XP_061505087.1 Gene:LOC1277251 / 1277251 VectorBaseID:AGAMI1_003927 Length:405 Species:Anopheles gambiae


Alignment Length:385 Identity:73/385 - (18%)
Similarity:135/385 - (35%) Gaps:101/385 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SPLLYCIMCLTTSFELC-------TVCAFMVQN----RNQIVLCSEALMHGLQMVSSLLKMAIFL 90
            |.|::..:|..|...|.       .|...:.|.    |::...||:.:   :::.:::.:.::..
Mosquito    71 SELIFAALCYLTIIILAIKSEPFRAVIRKLEQALELFRDKQDQCSQLI---IEVNANIHRFSLGY 132

  Fly    91 AKSHDLVDLIQQIQSPFTEEDLVGTEWR--SQNQRGQ----LMAAIYFMMCAGTSVSFLLMPVAL 149
            ||.:.|..|:..:..|.........:||  ..|:..:    ||..:|.:......|.:.:..||:
Mosquito   133 AKLNLLYVLLFNVIPPIYNYPRYFLQWRMPEDNRTVEFMLPLMQDLYGLDVHHNIVHYTISWVAI 197

  Fly   150 TMLKYHSTGEFAPVSSFRVLLPYDVTQPHVYAMDCCLMVFVLSFFCCSTTGVDTLYGWC--ALGV 212
            |                    |:.|                   ||       .|..|.  ||.:
Mosquito   198 T--------------------PFCV-------------------FC-------ALILWFKGALFM 216

  Fly   213 SLQYRRLGQQL-KRIPSCFNPSRSDFGLSGIFVE-HARLLKIVQ-HFNY--------SFMEIAFV 266
            .::|..|..|| .|:...::  |...|  |:..: |.||.:||| |:..        |.:.:..:
Mosquito   217 LIRYNTLLYQLVNRLLQQYD--RESAG--GLLAQKHRRLQQIVQLHYRAIECTKLLDSILSLILL 277

  Fly   267 EVVIICGLYCSVICQYIMPHTNQNFAFLGFFSLVVTTQLCIYLFGAEQVRLEAERFSRLLYEVIP 331
            ...|.|.|...::..||..:.:.|...:....:.:..::..:.:...|:..|....|...:. ..
Mosquito   278 IQCIGCLLMLCLMLFYITRNHSLNVINIAVLLMSIFIEMLCFSYLGNQLTEENANISHSAFN-CR 341

  Fly   332 WQNLPPKHRKLFLFPIERAQRETVLGAYFFELGRPLLVWIFRTAGSFTTLMNALYAKYET 391
            |.:.|...||.||..|.:|.|:..:                 |||.|..:....:|:..|
Mosquito   342 WYDEPIVIRKYFLRIILQAHRKATI-----------------TAGKFYNVNIVTFAQVST 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 58/315 (18%)
LOC1277251XP_061505087.1 None

Return to query results.
Submit another query.