DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13375 and Rgk3

DIOPT Version :10

Sequence 1:NP_569837.2 Gene:CG13375 / 30976 FlyBaseID:FBgn0040370 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001286670.1 Gene:Rgk3 / 5740446 FlyBaseID:FBgn0085426 Length:486 Species:Drosophila melanogaster


Alignment Length:329 Identity:72/329 - (21%)
Similarity:121/329 - (36%) Gaps:60/329 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RGRHLRRRFSLQPSFMKDDNAEDKP--KRDKVG------------------RNNAVDDAIGPANA 46
            ||...|||.|...|.     |...|  .|:.||                  ...:..:..|.|||
  Fly   166 RGDSFRRRRSRSNSL-----APSSPMHTRNGVGGLGGVAGGGSSLGLGCGYNGGSSSNGFGNANA 225

  Fly    47 R--------HKIVVMGSAKVGKTSIITQFLYNTFSTKYKRTIEEMHQGNFSIA--GVSLTLDILD 101
            :        :::.::|||.|||.::::||..:.....|.....:..:.|.||.  |....|..| 
  Fly   226 QENHQPVEFYRVEMLGSAGVGKQALLSQFRTSDCINAYDGPECDDAEQNVSIILNGTESELKFL- 289

  Fly   102 TAGSYEFPAMRALSISSADAFILVYDVTDATTFEEVRTIRDQIHETKATTAVPIVVVGNKIDLLA 166
             .|:.|...    .:..||||::||...|..:|...:.|..::.:.......|.::|.|||||  
  Fly   290 -TGNPESKD----ELEQADAFLVVYSCIDKESFTRAKQILSRLQDMDLLRHRPTILVANKIDL-- 347

  Fly   167 DGETEREVEYATTESVVTVDWENGFVEASASSNENITQVFKELLAQAKITYNLSPALRRRRQSLP 231
              ...|.|. |.....|...:...|:|.|...|.|..::....|.|          :|.::..:.
  Fly   348 --ARSRAVS-AQDGKCVACTFGAKFIEVSVGINHNCDELLAGTLTQ----------IRLKKDQVQ 399

  Fly   232 QQIGNNGPSTPLHHHQHTQHHNSGGGTSASTSSAAAAASSSGGSGSHAPTPAQLQHLQRIQERSL 296
            .|: |...|.....::..::.|.   .:..|.:......:..|....|.:||.....:.:...|:
  Fly   400 LQL-NPKKSKDKDKNKFKENTNI---ETVETDNCLTDLKADDGGPRDANSPAHWYKSRSVMLASM 460

  Fly   297 GAKR 300
            .|::
  Fly   461 KARQ 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13375NP_569837.2 Ras_dva 49..239 CDD:206714 47/191 (25%)
Rgk3NP_001286670.1 P-loop containing Nucleoside Triphosphate Hydrolases 235..>396 CDD:476819 45/181 (25%)

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