DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13375 and Rgk3

DIOPT Version :9

Sequence 1:NP_001162628.1 Gene:CG13375 / 30976 FlyBaseID:FBgn0040370 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001286670.1 Gene:Rgk3 / 5740446 FlyBaseID:FBgn0085426 Length:486 Species:Drosophila melanogaster


Alignment Length:329 Identity:72/329 - (21%)
Similarity:121/329 - (36%) Gaps:60/329 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RGRHLRRRFSLQPSFMKDDNAEDKP--KRDKVG------------------RNNAVDDAIGPANA 46
            ||...|||.|...|.     |...|  .|:.||                  ...:..:..|.|||
  Fly   166 RGDSFRRRRSRSNSL-----APSSPMHTRNGVGGLGGVAGGGSSLGLGCGYNGGSSSNGFGNANA 225

  Fly    47 R--------HKIVVMGSAKVGKTSIITQFLYNTFSTKYKRTIEEMHQGNFSIA--GVSLTLDILD 101
            :        :::.::|||.|||.::::||..:.....|.....:..:.|.||.  |....|..| 
  Fly   226 QENHQPVEFYRVEMLGSAGVGKQALLSQFRTSDCINAYDGPECDDAEQNVSIILNGTESELKFL- 289

  Fly   102 TAGSYEFPAMRALSISSADAFILVYDVTDATTFEEVRTIRDQIHETKATTAVPIVVVGNKIDLLA 166
             .|:.|...    .:..||||::||...|..:|...:.|..::.:.......|.::|.|||||  
  Fly   290 -TGNPESKD----ELEQADAFLVVYSCIDKESFTRAKQILSRLQDMDLLRHRPTILVANKIDL-- 347

  Fly   167 DGETEREVEYATTESVVTVDWENGFVEASASSNENITQVFKELLAQAKITYNLSPALRRRRQSLP 231
              ...|.|. |.....|...:...|:|.|...|.|..::....|.|          :|.::..:.
  Fly   348 --ARSRAVS-AQDGKCVACTFGAKFIEVSVGINHNCDELLAGTLTQ----------IRLKKDQVQ 399

  Fly   232 QQIGNNGPSTPLHHHQHTQHHNSGGGTSASTSSAAAAASSSGGSGSHAPTPAQLQHLQRIQERSL 296
            .|: |...|.....::..::.|.   .:..|.:......:..|....|.:||.....:.:...|:
  Fly   400 LQL-NPKKSKDKDKNKFKENTNI---ETVETDNCLTDLKADDGGPRDANSPAHWYKSRSVMLASM 460

  Fly   297 GAKR 300
            .|::
  Fly   461 KARQ 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13375NP_001162628.1 RAS 48..215 CDD:214541 44/168 (26%)
Ras_dva 49..239 CDD:206714 47/191 (25%)
Rgk3NP_001286670.1 P-loop_NTPase 235..>396 CDD:422963 45/181 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453020
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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