DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13375 and rasd4

DIOPT Version :9

Sequence 1:NP_001162628.1 Gene:CG13375 / 30976 FlyBaseID:FBgn0040370 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001007782.1 Gene:rasd4 / 553052 ZFINID:ZDB-GENE-050506-133 Length:208 Species:Danio rerio


Alignment Length:191 Identity:94/191 - (49%)
Similarity:128/191 - (67%) Gaps:4/191 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KIVVMGSAKVGKTSIITQFLYNTFSTKYKRTIEEMHQGNFSIAGVSLTLDILDTAGSYEFPAMRA 113
            ::|.||:|.||||::|.:||.::|..|::||:||:|...:.:|||.:|::|:||:|||.|||||.
Zfish    12 RLVFMGAAGVGKTALIKRFLQDSFEPKHRRTVEELHSKEYEVAGVKVTINIMDTSGSYSFPAMRK 76

  Fly   114 LSISSADAFILVYDVTDATTFEEVRTIRDQIHETKATTAVPIVVVGNKIDLLADGETEREVEYAT 178
            |||.:.|||.|||.|.|..:.|.|..:|::|.|.|.....||||||||.|.|    .||.|....
Zfish    77 LSIQNGDAFALVYSVDDPESLEVVNRLREEILEVKEDKFTPIVVVGNKKDRL----IERRVSADD 137

  Fly   179 TESVVTVDWENGFVEASASSNENITQVFKELLAQAKITYNLSPALRRRRQSLPQQIGNNGP 239
            ..:.|.:||.|.|:||||..|||:.:||||||.||.:...|||||||||::.|:.:....|
Zfish   138 VLAKVEMDWNNCFMEASAKENENVMEVFKELLQQANLPSRLSPALRRRRETFPKDLSLRPP 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13375NP_001162628.1 RAS 48..215 CDD:214541 83/165 (50%)
Ras_dva 49..239 CDD:206714 93/189 (49%)
rasd4NP_001007782.1 small_GTPase 9..173 CDD:197466 82/164 (50%)
Ras_dva 12..208 CDD:206714 94/191 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590892
Domainoid 1 1.000 161 1.000 Domainoid score I3987
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H78377
Inparanoid 1 1.050 183 1.000 Inparanoid score I3951
OMA 1 1.010 - - QHG46132
OrthoDB 1 1.010 - - D1398885at2759
OrthoFinder 1 1.000 - - FOG0009253
OrthoInspector 1 1.000 - - otm26248
orthoMCL 1 0.900 - - OOG6_111060
Panther 1 1.100 - - LDO PTHR24070
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16914
SonicParanoid 1 1.000 - - X5242
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.940

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