DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13375 and Rergl

DIOPT Version :10

Sequence 1:NP_569837.2 Gene:CG13375 / 30976 FlyBaseID:FBgn0040370 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001178908.1 Gene:Rergl / 500356 RGDID:1560090 Length:204 Species:Rattus norvegicus


Alignment Length:208 Identity:51/208 - (24%)
Similarity:90/208 - (43%) Gaps:34/208 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KIVVMGSAKVGKTSIITQFLYNTFSTKYKRTIEEMHQGNFSIAGVSLTLDILDTAG-SYEFPAMR 112
            |:.|:|....||:::..:||...|..:|....|.::..:..:.|..|.|:|.|... |.:.....
  Rat     5 KLAVLGGRGTGKSALTVRFLTKRFIGEYASNFESIYNKHLCLEGKPLNLEIYDPCSQSQKAKGSL 69

  Fly   113 ALSISSADAFILVYDVTDATTFEEVRTIRDQIHE-----TKATTAVPIVVVGNKIDLLADGETER 172
            ...:..||.|::|||:::..:|...:.:..:|.|     .|......:|:||||.||.    ..|
  Rat    70 TSDLHWADGFVIVYDISNRPSFAFAKALIYRIREPPMTHCKRVMEPAVVLVGNKQDLC----HMR 130

  Fly   173 EVEYATTESVVTVDWENGFVEASASSN------------ENITQVFKE--------LLAQAKITY 217
            ||.:...:.:.| |:...|.|.||:..            ::|..:||.        ..:.||:..
  Rat   131 EVGWDEGQKLAT-DYRCQFCELSAAEQSLEIEVMFLRLIKDILMIFKHKEKRRPSGSKSMAKLIN 194

  Fly   218 NLSPALRRRRQSL 230
            |:   ..:||:|:
  Rat   195 NV---FGKRRKSV 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13375NP_569837.2 Ras_dva 49..239 CDD:206714 51/208 (25%)
RerglNP_001178908.1 RERG_RasL11_like 5..171 CDD:206713 42/170 (25%)

Return to query results.
Submit another query.