DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13375 and CG5160

DIOPT Version :9

Sequence 1:NP_001162628.1 Gene:CG13375 / 30976 FlyBaseID:FBgn0040370 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001188708.1 Gene:CG5160 / 34015 FlyBaseID:FBgn0031906 Length:328 Species:Drosophila melanogaster


Alignment Length:319 Identity:70/319 - (21%)
Similarity:126/319 - (39%) Gaps:83/319 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KIVVMGSAKVGKTSIITQFLYNTFSTKYKRTIEEMHQGNFSIAGVSLTLDILDTAGSYEFPAMRA 113
            |::|:|.:.||||:::.:|:...|..:|...:|:::....::....:..||||..|  :...:..
  Fly    24 KVMVLGQSGVGKTAMVVRFITRRFIGEYDPNLEKIYTCQTTLDKEQIQFDILDATG--QLQELDG 86

  Fly   114 LSISS----ADAFILVYDVTDATTFEEVRTIRDQIHETKA-----------TTAVPIVVVGNKID 163
            :|:.|    ||||||:|.:||..:|:|...::..|:..|.           ...:|:::||||.|
  Fly    87 VSLESNIRWADAFILMYSITDKCSFDECSRLKFLINYNKRRRKLGSASKEYALDIPVILVGNKTD 151

  Fly   164 LLADGETEREVEYATTESVVTVDWENGFVEASAS---------SNENITQVFKELLAQAKITYNL 219
            ...|.....|            :.:..|.|.|.|         |.:.:..||:::....:: ::.
  Fly   152 QPGDRMVSLE------------EGQRRFRELSCSCFHEISVRESVDQVQNVFRDVFRFWRV-FSK 203

  Fly   220 SPALRRRRQSLPQQIGNNGPSTP------------LHHHQHT-------QHHNSGGGTSASTSSA 265
            .|.|:|   |.......:|..||            |...:|:       ....|.|..:.||...
  Fly   204 FPKLKR---STSDVANTDGILTPDSGSCSFYDASSLGVGRHSFLVIGSACLEESNGDHTESTDEI 265

  Fly   266 AAAASSSGGSGSHAPTPAQ----------------------LQHLQRIQERSLGAKRNS 302
            .:::.||..|...||..::                      |.|..|::.|...:.|.|
  Fly   266 TSSSLSSSRSDIDAPFRSRASTDGTLLSRPRRWRYPPPGCLLPHTNRVERRMSISTRGS 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13375NP_001162628.1 RAS 48..215 CDD:214541 46/189 (24%)
Ras_dva 49..239 CDD:206714 50/213 (23%)
CG5160NP_001188708.1 small_GTPase 21..196 CDD:197466 46/185 (25%)
RERG_RasL11_like 24..200 CDD:206713 46/189 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452997
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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