DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13375 and let-60

DIOPT Version :10

Sequence 1:NP_569837.2 Gene:CG13375 / 30976 FlyBaseID:FBgn0040370 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_502213.3 Gene:let-60 / 178104 WormBaseID:WBGene00002335 Length:184 Species:Caenorhabditis elegans


Alignment Length:196 Identity:64/196 - (32%)
Similarity:100/196 - (51%) Gaps:28/196 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 HKIVVMGSAKVGKTSIITQFLYNTFSTKYKRTIEEMHQGNFSIAGVSLTLDILDTAGSYEFPAMR 112
            :|:||:|...|||:::..|.:.|.|..:|..|||:.::....|.|.:..||||||||..|:.|||
 Worm     4 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMR 68

  Fly   113 ALSISSADAFILVYDVTDATTFEEVRTIRDQIHETKATTAVPIVVVGNKIDLLADGETEREVEYA 177
            ...:.:.:.|:||:.|.:|.:||.|...|:||...|.:..||:|:||||.||     :.|.|::.
 Worm    69 DQYMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDL-----SSRSVDFR 128

  Fly   178 TTESVVTVDWENGF----VEASASSNENITQVFKELLAQAKITYNLSPALRRRRQSLPQQIGNNG 238
            |.....     .|:    |:.||.:...:.:.|          |.|...:|:.|    ::..||.
 Worm   129 TVSETA-----KGYGIPNVDTSAKTRMGVDEAF----------YTLVREIRKHR----ERHDNNK 174

  Fly   239 P 239
            |
 Worm   175 P 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13375NP_569837.2 Ras_dva 49..239 CDD:206714 63/193 (33%)
let-60NP_502213.3 H_N_K_Ras_like 3..164 CDD:133338 59/179 (33%)

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