DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13375 and Rap1b

DIOPT Version :10

Sequence 1:NP_569837.2 Gene:CG13375 / 30976 FlyBaseID:FBgn0040370 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_599173.2 Gene:Rap1b / 171337 RGDID:620577 Length:184 Species:Rattus norvegicus


Alignment Length:166 Identity:63/166 - (37%)
Similarity:99/166 - (59%) Gaps:6/166 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 HKIVVMGSAKVGKTSIITQFLYNTFSTKYKRTIEEMHQGNFSIAGVSLTLDILDTAGSYEFPAMR 112
            :|:||:||..|||:::..||:...|..||..|||:.::....:......|:||||||:.:|.|||
  Rat     4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMR 68

  Fly   113 ALSISSADAFILVYDVTDATTFEEVRTIRDQIHETKATTAVPIVVVGNKIDLLADGETEREVEYA 177
            .|.:.:...|.|||.:|..:||.:::.:|:||...|.|..||:::||||.||    |.||.|...
  Rat    69 DLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDL----EDERVVGKE 129

  Fly   178 TTESVVTVDWEN-GFVEASASSNENITQVFKELLAQ 212
            ..:::.. .|.| .|:|:||.|..|:.::|.:|:.|
  Rat   130 QGQNLAR-QWSNCAFLESSAKSKINVNEIFYDLVRQ 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13375NP_569837.2 Ras_dva 49..239 CDD:206714 63/165 (38%)
Rap1bNP_599173.2 Rap1 3..167 CDD:133375 63/166 (38%)
Interaction with KRIT1. /evidence=ECO:0000250|UniProtKB:P61224 25..67 14/41 (34%)
Effector region. /evidence=ECO:0000305 32..40 4/7 (57%)

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