DRSC/TRiP Functional Genomics Resources

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Protein Alignment cin and gphna

DIOPT Version :9

Sequence 1:NP_477030.1 Gene:cin / 30973 FlyBaseID:FBgn0000316 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_021322844.1 Gene:gphna / 555470 ZFINID:ZDB-GENE-110127-3 Length:920 Species:Danio rerio


Alignment Length:913 Identity:249/913 - (27%)
Similarity:368/913 - (40%) Gaps:334/913 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ITFGVLTISDTCWQEPEKDTSGPILRQLIGETFANTQVIG--NIVPDEKDIIQQELRKWIDREEL 66
            |..|:||:||:|::...:|.||..|:.|:.:......:|.  .|||||.|.|::.|..|.|.:||
Zfish    15 IRVGILTVSDSCFRNLAEDRSGINLKDLVHDPSLLGGIISAYKIVPDEIDEIKEILVDWCDEKEL 79

  Fly    67 RVILTTGGTGFAPRDVTPEATRQLLEKECPQLSMYITLESIKQTQYAALSRGLCGIAGNTLILNL 131
            .:||||||||||||||||||||:::|:|.|.:::.:.:.|:..|....|||.:|||.|.|||:||
Zfish    80 NLILTTGGTGFAPRDVTPEATREVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINL 144

  Fly   132 PGSEKAVKECFQTISALLPHAVHLIGDDVSLVRKTH----------------------------- 167
            |||:|..:||||.|...||||:.|:.|.:..|::.|                             
Zfish   145 PGSKKGSQECFQFILPALPHAIDLLRDAIVKVKEVHDALEDLPSPPPPLSPPPTTSPHKQTEDKG 209

  Fly   168 ----------------------------AEVQGSAQKSHI------------------------- 179
                                        |.:...:..||:                         
Zfish   210 VQCEEEDEEKKDSGVASTEDSGSSHITAAAIAAKSMTSHLSHAVVMAKGGQPLSGFIPSTSIPSH 274

  Fly   180 -----------------------------------------------CP---------------- 181
                                                           ||                
Zfish   275 FTCSCSDTIPESIISRGVQVLPRDTASLSTTPSESPCAQQSRLSTASCPTPKARLTSCSSTYSVT 339

  Fly   182 ----------------HKTGTGT------------DSDRN------------------------- 193
                            ||:...|            |..||                         
Zfish   340 EASRREFRAHLDDVISHKSRYSTLDQLHSRLEGLKDDRRNHRTFDSRVQSRCSSKENILRASHSA 404

  Fly   194 ------------SPYPM-------LPVQEVLSIIFNTV---------------------QKTANL 218
                        ||:|:       :.|.|:..::...:                     |..::.
Zfish   405 VDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRGPYTGDLAPLPRKGIWRQNGSSW 469

  Fly   219 NKILL---------------------------------EMNAPVNIPPFRASIKDGYAMKSTGFS 250
            .||.|                                 ::.|..|:|||.||:|||||:::....
Zfish   470 RKIPLCTGAEAKAERRALANAAHTPKYCTDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGP 534

  Fly   251 GTKRVLGCIAAGDSPNSLPLAEDECYKINTGAPLPLEADCVVQVEDTKLLQLDKNGQESL-VDIL 314
            |.:.::|...||:.| :|.:...:..::.||||:|..||.|||||||:||:..::|.|.| |.||
Zfish   535 GDRFIIGESQAGEQP-TLTVMPGQVMRVTTGAPIPCGADAVVQVEDTELLRESEDGTEELEVRIL 598

  Fly   315 VEPQAGLDVRPVGYDLSTNDRIFPA---LDPSPVVVKSLLASVG-NRLILSK-PKVAIVSTGSEL 374
            |:.:.|.|:||:|:|:...:.:...   :.||.:   .|||:|| ..:.:.| |.||::|||:||
Zfish   599 VQARPGQDIRPIGHDIKRGECVLAKGTHMGPSEI---GLLATVGVTEVEVQKFPVVAVMSTGNEL 660

  Fly   375 CSPRNQLTPGKIFDSNTTMLTELLVYFGFNCMHTCVLSDSFQRTKESLLELFEVVDFVICSGGVS 439
            .:|.:.|.||||.|||.:.|...:...|:..::..::.|:......:|.|.....|.:|.|||||
Zfish   661 LNPEDDLHPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVS 725

  Fly   440 MGDKDFVKSVLE-DLQFRIHCGRVNIKPGKPMTFAS----RKDKYFFGLPG-------------- 485
            ||:||::|.||: ||..:||.|||.:|||.|.|||:    ...|..|.|||              
Zfish   726 MGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGARKLIFALPGNFTYRDTGATLLEA 790

  Fly   486 --------------------NPVSAFVTFHLFALPAIRFAAGWDRCKCSL----SVLNVKLLNDF 526
                                |||||.||.:||.:||:|...|      .|    :::..:|..|.
Zfish   791 VPLSDTEACRMPVPPPPRGSNPVSAVVTCNLFVIPALRKMQG------ILDPRPTIIKARLSCDV 849

  Fly   527 SLDSRPEFVRASVISKSGE--LYASVNGNQISSRLQSIVGADVLINLPARTSDRPLAKAGEIFPA 589
            .||.|||:.|..:.....|  .:|...|||:||||.|:..|:.|:.||.:|........||:...
Zfish   850 KLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDV 914

  Fly   590 SVL 592
            .|:
Zfish   915 MVI 917

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cinNP_477030.1 MogA_MoaB 4..156 CDD:238451 75/153 (49%)
MoeA 198..595 CDD:223380 156/507 (31%)
MoeA 211..592 CDD:238452 153/485 (32%)
gphnaXP_021322844.1 MogA_MoaB 15..169 CDD:238451 75/153 (49%)
MoeA 480..917 CDD:238452 149/446 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580307
Domainoid 1 1.000 142 1.000 Domainoid score I4628
eggNOG 1 0.900 - - E1_COG0303
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10820
Inparanoid 1 1.050 382 1.000 Inparanoid score I2008
OMA 1 1.010 - - QHG55901
OrthoDB 1 1.010 - - D1114121at2759
OrthoFinder 1 1.000 - - FOG0003343
OrthoInspector 1 1.000 - - otm25755
orthoMCL 1 0.900 - - OOG6_100792
Panther 1 1.100 - - LDO PTHR10192
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2231
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.770

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