DRSC/TRiP Functional Genomics Resources

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Protein Alignment cin and GPHN

DIOPT Version :9

Sequence 1:NP_477030.1 Gene:cin / 30973 FlyBaseID:FBgn0000316 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_011534642.1 Gene:GPHN / 10243 HGNCID:15465 Length:825 Species:Homo sapiens


Alignment Length:818 Identity:242/818 - (29%)
Similarity:362/818 - (44%) Gaps:239/818 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ITFGVLTISDTCWQEPEKDTSGPILRQLIGE--TFANTQVIGNIVPDEKDIIQQELRKWIDREEL 66
            |..||||:||:|::...:|.||..|:.|:.:  ....|.....|||||.:.|::.|..|.|.:||
Human    15 IRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKEL 79

  Fly    67 RVILTTGGTGFAPRDVTPE-------------ATRQLLEKECPQLSMYITLESIKQTQYAALSRG 118
            .:|||||||||||||||||             ||::::|:|.|.:::.:.:.|:..|....|||.
Human    80 NLILTTGGTGFAPRDVTPEKFPTFPFCGLQKGATKEVIEREAPGMALAMLMGSLNVTPLGMLSRP 144

  Fly   119 LCGIAGNTLILNLPGSEKAVKECFQTISALLPHAVHLIGDDVSLVRKTHAEVQG----------- 172
            :|||.|.|||:|||||:|..:||||.|...||||:.|:.|.:..|::.|.|::.           
Human   145 VCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPP 209

  Fly   173 --------------------------------SAQKSHI-------------------------- 179
                                            .:..|||                          
Human   210 PTTSPHKQTEDKGVQCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKKHPFYTSPAVVMAHGEQP 274

  Fly   180 -------------------------------------------------------CP-------- 181
                                                                   ||        
Human   275 IPGLINYSHHSTDERIPDSIISRGVQVLPRDTASLSTTPSESPRAQATSRLSTASCPTPKQIRRP 339

  Fly   182 ------------------------HKTG--------------------------TGTD------S 190
                                    |..|                          :..|      .
Human   340 DESKGVASRVGSLKLHRKLEELRDHLEGNVKGYSLRVNVQSRCSSKENILRASHSAVDITKVARR 404

  Fly   191 DRNSPYPM-------LPVQEVLSII-FNTVQKTANLNKILL-EMNAPVNIPPFRASIKDGYAMKS 246
            .|.||:|:       :.|.|:..:: ...:.....:.::|. ::.|..|:|||.||:|||||:::
Human   405 HRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRA 469

  Fly   247 TGFSGTKRVLGCIAAGDSPNSLPLAEDECYKINTGAPLPLEADCVVQVEDTKLLQLDKNGQESL- 310
            ....|.:.::|...||:.|.. .:...:..::.||||:|..||.|||||||:|::...:|.|.| 
Human   470 ADGPGDRFIIGESQAGEQPTQ-TVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELE 533

  Fly   311 VDILVEPQAGLDVRPVGYDLSTNDRIFPA---LDPSPVVVKSLLASVG-NRLILSK-PKVAIVST 370
            |.|||:.:.|.|:||:|:|:...:.:...   :.||.:   .|||:|| ..:.::| |.||::||
Human   534 VRILVQARPGQDIRPIGHDIKRGECVLAKGTHMGPSEI---GLLATVGVTEVEVNKFPVVAVMST 595

  Fly   371 GSELCSPRNQLTPGKIFDSNTTMLTELLVYFGFNCMHTCVLSDSFQRTKESLLELFEVVDFVICS 435
            |:||.:|.:.|.||||.|||.:.|...:...|:..::..::.|:......:|.|.....|.:|.|
Human   596 GNELLNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITS 660

  Fly   436 GGVSMGDKDFVKSVLE-DLQFRIHCGRVNIKPGKPMTFASRK----DKYFFGLPGNPVSAFVTFH 495
            ||||||:||::|.||: ||..:||.|||.:|||.|.|||:..    .|..|.||||||||.||.:
Human   661 GGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCN 725

  Fly   496 LFALPAIRFAAGWDRCKCSL----SVLNVKLLNDFSLDSRPEFVRASVISKSGE--LYASVNGNQ 554
            ||.:||:|...|      .|    :::..:|..|..||.|||:.|..:.....|  .:|...|||
Human   726 LFVVPALRKMQG------ILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQ 784

  Fly   555 ISSRLQSIVGADVLINLPARTSDRPLAKAGEIFPASVL 592
            :||||.|:..|:.|:.||.:|........||:....|:
Human   785 MSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVI 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cinNP_477030.1 MogA_MoaB 4..156 CDD:238451 74/166 (45%)
MoeA 198..595 CDD:223380 151/421 (36%)
MoeA 211..592 CDD:238452 148/398 (37%)
GPHNXP_011534642.1 MogA_MoaB 15..182 CDD:238451 74/166 (45%)
MoeA 416..822 CDD:238452 150/415 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146856
Domainoid 1 1.000 139 1.000 Domainoid score I4809
eggNOG 1 0.900 - - E1_COG0303
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10820
Inparanoid 1 1.050 382 1.000 Inparanoid score I2059
Isobase 1 0.950 - 0 Normalized mean entropy S5710
OMA 1 1.010 - - QHG55901
OrthoDB 1 1.010 - - D1114121at2759
OrthoFinder 1 1.000 - - FOG0003343
OrthoInspector 1 1.000 - - oto89311
orthoMCL 1 0.900 - - OOG6_100792
Panther 1 1.100 - - LDO PTHR10192
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3940
SonicParanoid 1 1.000 - - X2231
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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