DRSC/TRiP Functional Genomics Resources

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Protein Alignment G9a and setdb1b

DIOPT Version :9

Sequence 1:NP_001259088.1 Gene:G9a / 30971 FlyBaseID:FBgn0040372 Length:1657 Species:Drosophila melanogaster
Sequence 2:XP_005158070.2 Gene:setdb1b / 768131 ZFINID:ZDB-GENE-061013-224 Length:1242 Species:Danio rerio


Alignment Length:548 Identity:102/548 - (18%)
Similarity:150/548 - (27%) Gaps:287/548 - (52%)


- Green bases have known domain annotations that are detailed below.


  Fly  1344 RSFRPLGLRTFVVCADASNGREARPIQVVRNELAMSENEDEADSLMWPDFRYVTQCIIQQNSVQI 1408
            |.|:|  .|.|....|.::|||..|:..|          :|.|:...|...|..: .|.::.|.|
Zfish   707 RRFQP--QRPFYFIRDITSGREDIPLSCV----------NEIDNTPPPSVAYSKE-RIPEDGVYI 758

  Fly  1409 DRRVSQMRICSCLDSC-SSDRCQCNGASSQ-NWYTAESRL--NADFNYED-----PAVIFECNDV 1464
            :.....:..|.|.|.| ...:|.|:..:.| ...|...::  ||.::|:.     |..|:|||..
Zfish   759 NTSADFLVGCDCTDGCRDKSKCSCHQLTLQATGCTPGGQINPNAGYHYKRLDECLPTGIYECNKR 823

  Fly  1465 CGCNQLSCKNRVVQNGTRTPLQIVECEDQAKGWGVRALANVPKGTFVGSYTGEILTAMEADR--- 1526
            |.||...|.||:||:|.:..||:.  :.|.||||:|.|.::.||:||..|.|:|||...||:   
Zfish   824 CRCNMQMCTNRLVQHGLQVRLQLF--KTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGL 886

  Fly  1527 RTDDSYYFDLDN--------------GHC------------------------------------ 1541
            ...|.|:.:||:              .||                                    
Zfish   887 EMGDEYFANLDHIESVENFKEGYESEAHCSDSEGSGVDMSRVKLPASSRHGKSNKMEERNSSTTG 951

  Fly  1542 ----------------------------------------------------------------- 1541
                                                                             
Zfish   952 KSQDDSSEESDDEKDDDSNEDDSDSSDDTFVKDTYYTTSSVWRSYTTRRQAKGLKEESQDSKDGM 1016

  Fly  1542 ----------------------------------------------------------------- 1541
                                                                             
Zfish  1017 SVSAGEDRKPPHMPEETGKSKVASWLTNQSSTSANQSVKVEGGIKTEKKDVMTLSDSDDVQTISS 1081

  Fly  1542 ----------------------------------------------------------------- 1541
                                                                             
Zfish  1082 GSDDNKEREKKTQAVVKRQVAVKSTRGIALKSHSMMVKSGGGGAGGGGSGPSHGHGGGGGDNGPK 1146

  Fly  1542 --------------IDANYYGNVTRFFNHSCEPNVLPVRVFYEHQDYRFPKIAFFSCRDIDAGEE 1592
                          |||...||:.|:.||||.||:....||.:..|.|||.:|||:.:.|.||.|
Zfish  1147 NTRLFFDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTE 1211

  Fly  1593 ICFDYGEKFWRVEHRSCVGCRCLTTTCK 1620
            :.:||..:...||.:..: |.|.:|.|:
Zfish  1212 LTWDYNYEVGSVEGKELL-CCCGSTECR 1238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
G9aNP_001259088.1 ATP-synt_B 150..248 CDD:304375
Ank_2 1056..1152 CDD:289560
ANK 1088..1217 CDD:238125
ANK repeat 1088..1120 CDD:293786
ANK repeat 1124..1153 CDD:293786
Ank_2 1127..1249 CDD:289560
ANK 1155..1306 CDD:238125
ANK repeat 1155..1196 CDD:293786
ANK repeat 1199..1249 CDD:293786
Ank_2 1205..1316 CDD:289560
ANK repeat 1251..1283 CDD:293786
ANK repeat 1285..1316 CDD:293786
PreSET 1357..1466 CDD:128744 29/117 (25%)
SET 1495..1602 CDD:214614 50/368 (14%)
setdb1bXP_005158070.2 TUDOR 305..364 CDD:295375
TUDOR 395..446 CDD:197660
HMT_MBD 638..699 CDD:238689
Pre-SET 721..834 CDD:282838 32/123 (26%)
SET 842..>905 CDD:214614 24/64 (38%)
SET <1142..1219 CDD:214614 27/76 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593880
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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