DRSC/TRiP Functional Genomics Resources

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Protein Alignment G9a and suv39h2

DIOPT Version :9

Sequence 1:NP_001259088.1 Gene:G9a / 30971 FlyBaseID:FBgn0040372 Length:1657 Species:Drosophila melanogaster
Sequence 2:NP_001016508.1 Gene:suv39h2 / 549262 XenbaseID:XB-GENE-852675 Length:406 Species:Xenopus tropicalis


Alignment Length:223 Identity:82/223 - (36%)
Similarity:109/223 - (48%) Gaps:27/223 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1418 CSCLDSCSSDRCQCNGASSQNWYTAESRLNADFNYEDPAVIFECNDVCGCNQLSCKNRVVQNGTR 1482
            |.|.| |...:| |...:...:...|.|   .........|:|||..|.|.. .|.|||||.|..
 Frog   187 CDCSD-CFKGKC-CPTEAGVLFAYNEHR---QIKIPPGRPIYECNSRCKCGP-DCPNRVVQKGPP 245

  Fly  1483 TPLQIVECEDQAKGWGVRALANVPKGTFVGSYTGEILTAMEADRRTDD------SYYFDLD---N 1538
            ..|.|.. .|..:||||:.|..:.|.:||..|.||::|:.||:||...      :|.||||   :
 Frog   246 YSLCIFR-TDNGRGWGVKTLQKIKKNSFVMEYVGEVITSEEAERRGQQYDSRGITYLFDLDYEAD 309

  Fly  1539 GHCIDANYYGNVTRFFNHSCEPNVLPVRVFYEHQDYRFPKIAFFSCRDIDAGEEICFDYGEK--- 1600
            ...:||..||||:.|.||||:||:....||.::.|.|.|:||.||.|:|.||||:.|||..|   
 Frog   310 EFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDVRLPRIALFSTRNIKAGEELTFDYQMKGSG 374

  Fly  1601 --------FWRVEHRSCVGCRCLTTTCK 1620
                    ....:.|..:.|:|...||:
 Frog   375 DFSTDSIDMSPAKKRVRIACKCGAATCR 402

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
G9aNP_001259088.1 ATP-synt_B 150..248 CDD:304375
Ank_2 1056..1152 CDD:289560
ANK 1088..1217 CDD:238125
ANK repeat 1088..1120 CDD:293786
ANK repeat 1124..1153 CDD:293786
Ank_2 1127..1249 CDD:289560
ANK 1155..1306 CDD:238125
ANK repeat 1155..1196 CDD:293786
ANK repeat 1199..1249 CDD:293786
Ank_2 1205..1316 CDD:289560
ANK repeat 1251..1283 CDD:293786
ANK repeat 1285..1316 CDD:293786
PreSET 1357..1466 CDD:128744 12/47 (26%)
SET 1495..1602 CDD:214614 53/126 (42%)
suv39h2NP_001016508.1 CHROMO 43..90 CDD:214605
Pre-SET 152..238 CDD:282838 15/56 (27%)
SET 246..369 CDD:214614 54/123 (44%)
S-adenosyl-L-methionine binding. /evidence=ECO:0000250 257..259 0/1 (0%)