DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment G9a and set-13

DIOPT Version :9

Sequence 1:NP_001259088.1 Gene:G9a / 30971 FlyBaseID:FBgn0040372 Length:1657 Species:Drosophila melanogaster
Sequence 2:NP_494371.1 Gene:set-13 / 173626 WormBaseID:WBGene00019690 Length:402 Species:Caenorhabditis elegans


Alignment Length:368 Identity:80/368 - (21%)
Similarity:127/368 - (34%) Gaps:106/368 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1341 MQMRSFRPLGLRTFVVCADASNGREARPIQVVRNE-LAMSEN-EDEA--DSLMWPD---FRYVTQ 1398
            |..|:.|.......:.........||..|.|.:.. :.|:.| .|:|  |..|||.   |..:..
 Worm    32 MSSRTLRSSSSSNAISTKTQPKTEEAPLIPVTKGPVIRMTSNMADKAQNDHSMWPSTSKFESIWG 96

  Fly  1399 CIIQQ-----------NSVQIDRRVSQMRICSCL--DSCSSD-RCQCNGASSQNWYTAESRLNAD 1449
            .::.:           ..::|:.:|:    |.|.  ..||:: .|:|        :...|||...
 Worm    97 NVLGERVNKSTIAAIREGMKIENKVT----CGCRPGQDCSTNPACRC--------FQTASRLREH 149

  Fly  1450 FN-----------------YEDPAVIFECNDVCGCNQLSCKNRVVQNGTRTPLQIVECEDQA--- 1494
            |.                 ::.|  :|.|:..|||.. .|....:|:         .|||.|   
 Worm   150 FGSDILTRGKPVKTVDTMYWDRP--MFACSGSCGCKG-QCNLNALQD---------ICEDPAKKF 202

  Fly  1495 -------KGWGVRALANVPKGTFVGSYTGEILTAMEADRRTD-DSYYFDLDNGHCIDANYY---- 1547
                   ||:.|.:...:.||:.|..::|||...:......| :.|...|.|......:::    
 Worm   203 KITRTDGKGFCVYSARVIKKGSPVLEFSGEITDYLAIKSNADIEQYSIMLYNNETKLCDFFSKEE 267

  Fly  1548 -------------------------GNVTRFFNHSCEPNVLPVRVFYEHQDYRFPKIAFFSCRDI 1587
                                     ||..|||:|.|:.|:...|||.........||..|:...|
 Worm   268 NLSSKYKKILWSAYRSKAWINPLNRGNCARFFSHGCKANMELGRVFQGGFSPADMKIVLFAKEII 332

  Fly  1588 DAGEEICFDYGEKFWRVEHRSCVGCRCLTTTCKYASQSSSTNA 1630
            ..|.|:.|:||..:..:    .:|.:||...||..:.....||
 Worm   333 KPGTELTFNYGPSYKEI----FLGNKCLCEACKKEAVKKLENA 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
G9aNP_001259088.1 ATP-synt_B 150..248 CDD:304375
Ank_2 1056..1152 CDD:289560
ANK 1088..1217 CDD:238125
ANK repeat 1088..1120 CDD:293786
ANK repeat 1124..1153 CDD:293786
Ank_2 1127..1249 CDD:289560
ANK 1155..1306 CDD:238125
ANK repeat 1155..1196 CDD:293786
ANK repeat 1199..1249 CDD:293786
Ank_2 1205..1316 CDD:289560
ANK repeat 1251..1283 CDD:293786
ANK repeat 1285..1316 CDD:293786
PreSET 1357..1466 CDD:128744 28/146 (19%)
SET 1495..1602 CDD:214614 33/136 (24%)
set-13NP_494371.1 SET 200..348 CDD:214614 33/147 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165866
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.