DRSC/TRiP Functional Genomics Resources

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Protein Alignment G9a and setmar

DIOPT Version :9

Sequence 1:NP_001259088.1 Gene:G9a / 30971 FlyBaseID:FBgn0040372 Length:1657 Species:Drosophila melanogaster
Sequence 2:NP_001107735.1 Gene:setmar / 100135741 XenbaseID:XB-GENE-490240 Length:284 Species:Xenopus tropicalis


Alignment Length:269 Identity:84/269 - (31%)
Similarity:115/269 - (42%) Gaps:70/269 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1391 PDFRYVTQCIIQQNSVQIDRRVSQMRICSCLDS-CSSDRCQCNGASSQNWYTAESRLNADFNYED 1454
            |.|:|..:.|....:.|....|: ::.|.|..| |.::.|.|              |....||..
 Frog    35 PAFQYTPELIAGPGAEQDPSEVT-IQGCDCRGSNCVAELCSC--------------LPHGTNYVR 84

  Fly  1455 PAVIF------ECNDVCGCNQLSCKNRVVQNGTRTPLQIVECEDQAKGWGVRALANVPKGTFVGS 1513
            ..::.      ||:.:|.|.: ||.||..|.|.:..||:  |:...|||||..|.::|.|.||..
 Frog    85 RTIVSGQRPVRECHIMCSCGE-SCPNRETQQGLQYQLQL--CQRPGKGWGVCTLEDIPSGRFVCE 146

  Fly  1514 YTGEILTAMEADRRTDDSYYFDLDNGHC---------------------IDANYYGNVTRFFNHS 1557
            |.||:|...:|..||       |....|                     :|..:.|||.||.|||
 Frog   147 YAGEVLGHEQARSRT-------LSQNPCANNYIIAVREHLHGGQILQTFVDPTHIGNVGRFLNHS 204

  Fly  1558 CEPN--VLPVRVFYEHQDYRFPKIAFFSCRDIDAGEEICFDYGEKFWR----------VEHRSCV 1610
            |:||  ::|||.   |.  ..||:|.|:.|||.||||:|:||..||:.          .|..|..
 Frog   205 CDPNLFMMPVRT---HS--MVPKLALFAARDIQAGEELCYDYSGKFFNQTPACETLDPEEPSSRK 264

  Fly  1611 GCRCLTTTC 1619
            .|:|....|
 Frog   265 KCQCGARAC 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
G9aNP_001259088.1 ATP-synt_B 150..248 CDD:304375
Ank_2 1056..1152 CDD:289560
ANK 1088..1217 CDD:238125
ANK repeat 1088..1120 CDD:293786
ANK repeat 1124..1153 CDD:293786
Ank_2 1127..1249 CDD:289560
ANK 1155..1306 CDD:238125
ANK repeat 1155..1196 CDD:293786
ANK repeat 1199..1249 CDD:293786
Ank_2 1205..1316 CDD:289560
ANK repeat 1251..1283 CDD:293786
ANK repeat 1285..1316 CDD:293786
PreSET 1357..1466 CDD:128744 17/81 (21%)
SET 1495..1602 CDD:214614 50/129 (39%)
setmarNP_001107735.1 SET_SETMAR 35..282 CDD:380942 84/269 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D563968at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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