DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3038 and bre-5

DIOPT Version :10

Sequence 1:NP_569833.1 Gene:CG3038 / 30970 FlyBaseID:FBgn0040373 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001255612.1 Gene:bre-5 / 178142 WormBaseID:WBGene00000270 Length:322 Species:Caenorhabditis elegans


Alignment Length:260 Identity:60/260 - (23%)
Similarity:118/260 - (45%) Gaps:39/260 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 LAVLIVTSYAGHDALRSAHRQAIPQSK-LEEMGLRRVFLLAALPSREHFISQDQLASEQNRFGDL 149
            :.::|:.|.|.:..:|.:.|:.....: ::.:.:..:|::..:.:.|   ...::..|..::.|:
 Worm    78 IIIIIIKSSAKNGPMRESVRKTWGVFRMIDGVEVMPIFIVGRVENME---IMRRIDVESEKYKDI 139

  Fly   150 LQGNFIEDYRNLSYKHVMGLKWVS--EECKKQAKFIIKLDDDIIYDVFHLRRYLETLEVREPGLA 212
            |..:.|:.|||.:.|....:.:.:  .:| ....|...:|||.:..:.:|.::.:|.:..|    
 Worm   140 LAISDIDSYRNNTLKLFGAIDYAANPNQC-SSPDFTFLVDDDYLVHIPNLVKFAKTKQKEE---- 199

  Fly   213 TSSTLLSGYVLDAKPPIRLRANKWYVSKKEYPQALYPAYLS-GWLYVTNVPTAERIVAEAERMSF 276
               .:..|:|.|.. |.||:.:|..:|..|||.:.||.|:| |.:::|: .|..|......::..
 Worm   200 ---LVYEGFVFDTS-PFRLKIHKHSISLNEYPFSRYPPYVSAGAVFLTS-ETIARFRNSIRKLKM 259

  Fly   277 FWIDDTWLTGVVRTRLGIPLERHNDWFSANAEFIDCCVRDLKK---------HNY-----ECEYS 327
            |..||.: ||::...:.: ...||:      .||..|.|..:|         |.|     |.|||
 Worm   260 FPFDDVF-TGILAKTVNV-AATHNE------NFIFWCRRVSQKEWDDGVIAVHGYARKDLEYEYS 316

  Fly   328  327
             Worm   317  316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3038NP_569833.1 Galactosyl_T 103..297 CDD:473923 43/197 (22%)
bre-5NP_001255612.1 Galactosyl_T 93..282 CDD:473923 45/203 (22%)

Return to query results.
Submit another query.