Sequence 1: | NP_001020058.1 | Gene: | Sigirr / 309106 | RGDID: | 1306732 | Length: | 409 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_731246.2 | Gene: | CG45263 / 50003 | FlyBaseID: | FBgn0266801 | Length: | 1876 | Species: | Drosophila melanogaster |
Alignment Length: | 218 | Identity: | 47/218 - (21%) |
---|---|---|---|
Similarity: | 81/218 - (37%) | Gaps: | 58/218 - (26%) |
- Green bases have known domain annotations that are detailed below.
Rat 9 PNFLSPSEDQALGPALGSAVALNCTAWVFSRPQCPQPSVQWLKDGLALGNGSHFSLHQDFWVSDN 73
Rat 74 FSEIVSSVLVFNLTKAEDYGTFTCSAWN--------VSSHSFTLWRAG--------PAGHVAAVL 122
Rat 123 ---ASLLVLVVLLLVALLYVKC---RLNVLLWYQDTYGEVEMNDGKLYDAYVSYSDRPEDRK--F 179
Rat 180 VN--FILKPQLERRRGYKLFLED 200 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sigirr | NP_001020058.1 | Ig_3 | 9..101 | CDD:404760 | 23/91 (25%) |
Ig strand B | 28..32 | CDD:409353 | 1/3 (33%) | ||
Ig strand C | 46..50 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 80..84 | CDD:409353 | 0/3 (0%) | ||
Ig strand F | 94..99 | CDD:409353 | 1/4 (25%) | ||
TIR | 164..309 | CDD:214587 | 9/41 (22%) | ||
CG45263 | NP_731246.2 | I-set | 53..149 | CDD:254352 | |
Ig | 198..281 | CDD:299845 | |||
IG_like | 302..368 | CDD:214653 | |||
IGc2 | 302..357 | CDD:197706 | |||
Ig | 372..446 | CDD:299845 | 23/92 (25%) | ||
Ig | 475..568 | CDD:299845 | 20/96 (21%) | ||
IG_like | 478..570 | CDD:214653 | 19/93 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |