Sequence 1: | XP_038967907.1 | Gene: | Myh14 / 308572 | RGDID: | 1306821 | Length: | 2041 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001162991.1 | Gene: | Mhc / 35007 | FlyBaseID: | FBgn0264695 | Length: | 1962 | Species: | Drosophila melanogaster |
Alignment Length: | 2069 | Identity: | 759/2069 - (36%) |
---|---|---|---|
Similarity: | 1175/2069 - (56%) | Gaps: | 155/2069 - (7%) |
- Green bases have known domain annotations that are detailed below.
Rat 17 PGPV----PEAAQPFLFA---PRTPNVGGPGGPQVEWTARRMVWVPSELHGFEAAALRDEGEEEA 74
Rat 75 EVELAESGRRLRLPRDQIQRMNPPKFSKAEDMAELTCLNEASVLHNLRERYYSGLIYTYSGLFCV 139
Rat 140 VINPYKQLPIYTEAIVEMYRGKKRHEVPPHIYAVTEGAYRSMLQDREDQSILCTGESGAGKTENT 204
Rat 205 KKVIQYLAHVASSPKGRKEPGVPASVSTMSYGELERQLLQANPILEAFGNAKTVKNDNSSRFGKF 269
Rat 270 IRINFDIAGYIVGANIETYLLEKSRAIRQAKDECSFHIFYQLLGGAGEQLK-ADLLLEPYSHYRF 333
Rat 334 LTNGPSSSPG-QERELFQETLESLRVLGLLPEEITAMLRTVSAVLQFGNIVLKKERNTDQATMPD 397
Rat 398 NTAAQKLCRLLGLGVTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEALAKATYERLFRWLVLR 462
Rat 463 LNRALDRSPRQGASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGI 527
Rat 528 PWTFLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPKATDKSFVEKVAQEQ-GSHPKFQRPRN 591
Rat 592 LR---DQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQSTDRLTAEIWKDEQGGLQQFT 653
Rat 654 FLGSFPSPSPGPAGGLSSGASPPGLGSLCAPTVEGIVGLEQVSSLGDGPPGGRPRR-GMFRTVGQ 717
Rat 718 LYKESLSRLMATLSNTNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRIL 782
Rat 783 FQEFRQRYEILTPNAIPKGFMDGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEERDLK 847
Rat 848 VTDIIVSFQAAARGYLARRAFQRRQQQQSALRVMQRNCAAYLKLRNWQWWRLFIKVKPLLQVTR- 911
Rat 912 QDEVLQARAQE-LQKVQELQQQSAREVGELQGRVAQLEEERARLAEQLRAEAELCSEAEETRARL 975
Rat 976 AARKQELELVVTELEARVGEEEECSRQLQSEKKRLQQHIQELETHLEAEEGARQKLQLEKVTTEA 1040
Rat 1041 KMKKFEEDLLLLEDQNSKLSKERRLLEERLAEFSSQAAEEEEKVKSLNKLRVKYEATIADMEDRL 1105
Rat 1106 KKEEKGRQELEKLKRRLDGESSELQEQMMEQKQRAEELLIQLGRKEEELQSALVRAEEEGGARAQ 1170
Rat 1171 LLKSLREAQAGLAEAQEDLEAERVARAKAEKQRRDLGEELEALRGELEDTLDSTNAQQELRSKRE 1235
Rat 1236 QEVTELKKTLEEEARTHEVAMQELRQRHSQALVELTEQLEQARRGKSVWEKTRLSLEAEVSELKT 1300
Rat 1301 ELSSLQTSRQEGEQKRRRLESQLQEVQGRSSDSERARAEAAEKLQRAQVELESVSTALSEAESKA 1365
Rat 1366 IRLSKELSSAESQLHDTQELLQEETRAKLALGSRVRALEAEAAGLREQMEEEVVARERAGRELQT 1430
Rat 1431 TQAQLSEWRRRQEEE-AAVLEAGEEARRRAAREAETLAQRLAEKTEAVER-------LERARRRL 1487
Rat 1488 QQELDDATVDLGQQKQLLSTLEKKQRKFDQLLAEEKAAVLRAVEDRERVEAEGREREARALS--- 1549
Rat 1550 --LTRALEEEQEAREELERQNRALRAELEALLSSKDDVGKNVHELERARRVAEQAASDLRTQVTE 1612
Rat 1613 LEDELTAAEDAKLRLEVTVQALKAQHERDLQGRDDAGEERRRQLAKQLRDAEVERDEERKQRALA 1677
Rat 1678 MAARKKLELELEELKAQTSAAGQGKEEAVKQLKKMQAQMKELWREVEETRSSREEMFTLSRE--- 1739
Rat 1740 -SEKRLKGLEAEVLRLQEELAASDRARRQAQQ---DRDEMAEEVASGNLSKAATLEEKRQLEGRL 1800
Rat 1801 GQLEEELEEEQNNSELLKDHYRKLVLQVETLTTELSAERSFSAKAESGRQQLERQIQELRARLGE 1865
Rat 1866 EDAGARARQKMLIAALESKLAQAEEQLEQESRERILSGKLVRRAEKRLKEVVLQVDEERRVADQL 1930
Rat 1931 RDQLEKSNLRLKQLKRQLEEAEEEASRAQAGRRRLQRELEDVTESAESMNREVTTLRNRLRRGPL 1995
Rat 1996 TFTTRTVRQVFRLEEGVASDEEEAEGAEPGSAPTQ-EPE----APPP---AAPQ 2041 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Myh14 | XP_038967907.1 | Motor_domain | 115..833 | CDD:419868 | 330/724 (46%) |
Myosin_tail_1 | 910..1990 | CDD:396244 | 345/1101 (31%) | ||
Mhc | NP_001162991.1 | Myosin_N | 36..73 | CDD:280832 | 7/37 (19%) |
MYSc | 81..777 | CDD:214580 | 352/755 (47%) | ||
MYSc_Myh1_insects_crustaceans | 100..765 | CDD:276874 | 330/724 (46%) | ||
Myosin_tail_1 | 842..1897 | CDD:279860 | 337/1075 (31%) | ||
V_Alix_like | 1557..1877 | CDD:187408 | 98/326 (30%) | ||
ATP-synt_B | <1671..1771 | CDD:304375 | 33/102 (32%) | ||
TMPIT | 1739..>1825 | CDD:285135 | 27/85 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0161 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D47111at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000014 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100110 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X58 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.720 |