DRSC/TRiP Functional Genomics Resources

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Protein Alignment CXXC1 and cfp-1

DIOPT Version :9

Sequence 1:NP_001095124.1 Gene:CXXC1 / 30827 HGNCID:24343 Length:660 Species:Homo sapiens
Sequence 2:NP_001379228.1 Gene:cfp-1 / 178363 WormBaseID:WBGene00009924 Length:508 Species:Caenorhabditis elegans


Alignment Length:528 Identity:127/528 - (24%)
Similarity:207/528 - (39%) Gaps:159/528 - (30%)


- Green bases have known domain annotations that are detailed below.


Human   169 CGECEACRRTEDCGHCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYKYFPSSLSPVTPSESLP 233
            |..|..|...::||.|..||:.|          .|.:|:| ..|:..|            :|.:.
 Worm    17 CMNCIRCNDEKNCGTCWPCRNGK----------TCDMRKC-FSAKRLY------------NEKVK 58

Human   234 RPRRPLPTQQQPQPSQKLGRIREDEGAVASSTVKEPP-EATATPEPLSDEDLPLDPDLYQDFCAG 297
            |           |..:.|..|      :|.:..:|.. :|..|..|.:                 
 Worm    59 R-----------QTDENLKAI------MAKTAQREAAHQAATTTAPSA----------------- 89

Human   298 AFDDHGLPWMSDTEESPFLDPALRKRAVKVKHVKRREKK-------------------SEKKVME 343
                                |.:.::.|:.|  ||..||                   :|:..:.
 Worm    90 --------------------PVVIEQQVEKK--KRGRKKGSGNGGAAAAAQQRKANIINERDYVP 132

Human   344 RKEERYK----RHRQKQKHKDKWKHPERADAKDPASLPQCLGPGCVRPAQPSSKYCSDDCGMKLA 404
            .:..|.:    |.::.|.:.:..|||.           |||.|.|:..::..||||||:||.:||
 Worm   133 NRPTRQQSADLRRKRTQLNAEPDKHPR-----------QCLNPNCIYESRIDSKYCSDECGKELA 186

Human   405 ANRIYEILPQRIQQW-----QQSPCIAEEHGKKLLERIRREQQSARTRLQEMERRFHE-----LE 459
            ..|:.||||.|.:|:     ...|...|:..|....:|.||.|    :|.|.|:....     :|
 Worm   187 RMRLTEILPNRCKQYFFEGPSGGPRSLEDEIKPKRAKINREVQ----KLTESEKNMMAFLNKLVE 247

Human   460 AIILRAKQQAVREDEESNEGDSDDTDLQIFCVSCGHPINPRVA-LRHMERCYAKYESQTSFGSMY 523
            .|..:.|.|.:..:|..      |.:|...|:.||.|..|.:. .:|:|.|:|:.|...|||:  
 Worm   248 FIKTQLKLQPLGTEERY------DDNLYEGCIVCGLPDIPLLKYTKHIELCWARSEKAISFGA-- 304

Human   524 PTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPADEVCGCP------------LVRDV 576
            |.:  .....:|:.|:.::.::||||:.|||||.:.......:|||.|            .|.::
 Worm   305 PEK--NNDMFYCEKYDSRTNSFCKRLKSLCPEHRKLGDEQHLKVCGYPKKWEDGMIETAKTVSEL 367

Human   577 FELTGDF----CRLPKRQCNRHYCWEKLRRAEVDLERVRVWYKLDELFEQ--ERNVRTAMTNRAG 635
            .|:...|    ||..|..|::|:.|....|..::||:..::.|:.||..:  :.|.....|..| 
 Worm   368 IEMEDPFGEEGCRTKKDACHKHHKWIPSLRGTIELEQACLFQKMYELCHEMHKLNAHAEWTTNA- 431

Human   636 LLALMLHQ 643
             |::|:|:
 Worm   432 -LSIMMHK 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CXXC1NP_001095124.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
PHD_Cfp1 28..73 CDD:277028
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..162
zf-CXXC 162..208 CDD:366873 11/38 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..287 10/68 (15%)
zf-CpG_bind_C 406..640 CDD:403474 72/262 (27%)
cfp-1NP_001379228.1 zf-CpG_bind_C 188..435 CDD:403474 72/262 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 83 1.000 Domainoid score I5870
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48041
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003492
OrthoInspector 1 1.000 - - oto21944
orthoMCL 1 0.900 - - OOG6_107072
Panther 1 1.100 - - LDO PTHR46174
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3950
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.920

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