DRSC/TRiP Functional Genomics Resources

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Protein Alignment SOX8 and Sox100B

DIOPT Version :9

Sequence 1:NP_055402.2 Gene:SOX8 / 30812 HGNCID:11203 Length:446 Species:Homo sapiens
Sequence 2:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster


Alignment Length:498 Identity:146/498 - (29%)
Similarity:190/498 - (38%) Gaps:155/498 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    52 ARGDPAEAADERFPACIRDAVSQVLKGYDWSLVPMPVRGGGGGALKAKPHVKRPMNAFMVWAQAA 116
            |:|......|||    |..||.:||:||||:||....:....   :.|.|:||||||||||||||
  Fly    34 AQGQGGRKEDER----ITTAVMKVLEGYDWNLVQASAKAPTD---RKKEHIKRPMNAFMVWAQAA 91

Human   117 RRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKA 181
            ||.::.|||||.|:||||:|||||:.|.:|:|:||:|.||:||:.||::||||||||||:|:...
  Fly    92 RRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQEHPDYKYQPRRKKARVL 156

Human   182 GHSDSDSGAELGP-----------------------HPGGGAVYKAEAGLGD----------GHH 213
            ....|..|...||                       ..|.|   .|.|.||.          |.:
  Fly   157 PSQQSGEGGSPGPEMTLSATMGSSGKPRSSNSNGQRRAGKG---NAAADLGSCASTISHANVGSN 218

Human   214 HGD---------------------------------HTGQTHGPPTPPTT-----PKTELQQAGA 240
            ..|                                 .|..:....|||.|     |......|..
  Fly   219 SSDVFSNEAFMKSLNSACAASLMEQSLIETGLDSPCSTASSMSSLTPPATPYNVAPSNAKASAAN 283

Human   241 KPELKL-EGRRPV-----------DSGRQNIDFSNVDISELSSEVM------GTMDAFD-VHEFD 286
            .|.|.| :...||           ::||:.:....|:....|:.|.      |.....| :...:
  Fly   284 NPSLLLRQLSEPVANAGDGYGVLLEAGREYVAIGEVNYQGQSAGVQSGAEGGGAGQEMDFLENIN 348

Human   287 QYLPLGGPAPPEPGQAY--GGAYFHA---------GASPVWAHKSAPSASASPTE---------- 330
            .|....|.....|..:|  .|.:|..         .||....:|.| :|...|.|          
  Fly   349 GYGGYTGSRVSYPAYSYPANGGHFATEEQQQQQALQASEALNYKPA-AADIDPKEIDQYFMDQML 412

Human   331 --TGPPRPHIKTEQPSPGHYGDQPRGSPDYGS-CSGQSSATPAAPAGPFAGSQGDYGDLQASSYY 392
              |....||.......|.|:......|....| ||..||..|.|                  .||
  Fly   413 PMTQHHHPHHTHPLHHPLHHSPPLNSSASLSSACSSASSQQPVA------------------EYY 459

Human   393 GAYPGYAP---GLYQYPCFHSPRRPYASPLLNGLALPPAHSPT 432
             .:.||:|   ...|.|.| .|::|||    ||.|   :.:||
  Fly   460 -EHLGYSPAASSASQNPNF-GPQQPYA----NGAA---SMTPT 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SOX8NP_055402.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58 2/5 (40%)
Sox_N 18..89 CDD:315171 16/36 (44%)
Dimerization (DIM). /evidence=ECO:0000303|PubMed:31194875 58..100 14/41 (34%)
SOX-TCF_HMG-box 101..171 CDD:238684 48/69 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..259 43/186 (23%)
Transactivation domain (TAM). /evidence=ECO:0000303|PubMed:31194875 224..298 20/97 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..378 18/72 (25%)
Transactivation domain (TAC). /evidence=ECO:0000303|PubMed:31194875 335..446 29/102 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..446 2/8 (25%)
Sox100BNP_651839.1 SOX-TCF_HMG-box 76..146 CDD:238684 48/69 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 115 1.000 Domainoid score I6018
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 181 1.000 Inparanoid score I3995
Isobase 1 0.950 - 0 Normalized mean entropy S11712
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 1 1.000 - - otm40903
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45803
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5318
SonicParanoid 1 1.000 - - X1210
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
109.940

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