DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc22a4 and CG6356

DIOPT Version :9

Sequence 1:NP_062661.1 Gene:Slc22a4 / 30805 MGIID:1353479 Length:553 Species:Mus musculus
Sequence 2:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster


Alignment Length:533 Identity:151/533 - (28%)
Similarity:247/533 - (46%) Gaps:28/533 - (5%)


- Green bases have known domain annotations that are detailed below.


Mouse    11 LGEWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPEHR-CLVPD--TVNLSSSWRNHSIPLETK 72
            :|..|.|...||||.....|.|||:..|...|...|:.: |.:|:  ..|.:.:.:...:.....
  Fly    31 VGSGGAFVWAIFFLCVTPNILNGFHVSSYTLLGHLPDDQWCGIPELQDTNWTHAQKREIVAKGLD 95

Mouse    73 DGRQVPQSCRRYRLATIANFSAMGLEPGQDVDLEQLEQESCLDGWEYDKDIFLSTIVTEWNLVCE 137
            .|...........||.::..:|:.. .|....:....:.||....:::.....:|.|.:|:|.|:
  Fly    96 SGGCTVWDWNYGHLAKMSYEAALNY-TGHLTQISPPAEVSCRVKGQHEFAHPETTFVADWDLTCD 159

Mouse   138 DDWKTPLTTSLFFVGVLCGSFVSGQLSDRFGRKKVLFATMAVQTGFSFVQIFSTNWEMFTVLFAI 202
            ...:.........:|..||||..|.|:|:||||.......|.....||...||..:.:|......
  Fly   160 RSIQRTSAQVSISLGKFCGSFSFGILADKFGRKSSFTLGAAFFIVGSFFCTFSPWYSLFLAGRFA 224

Mouse   203 VGMGQISNYVVAFILGTEILSKSVR----IIFSTLGVCTFFAIGYMVLPLFAYFIRDWRMLLLAL 263
            :|......:..||.:..|.:....|    |.||     ..:.:|.::|.:..|.|:.||.|.|||
  Fly   225 LGAASSGLFYPAFTMIVENICLKHRSWMSIAFS-----ASYPVGMIILAIVGYVIQPWRHLQLAL 284

Mouse   264 TLPGLFCVPLWWFIPESPRWLISQRRFAEAEQIIQKAAK----MNSIVAPAGIFD---PLELQEL 321
            |:|.|..:...:.:.|||||||:.:|:....:|:.:...    ..::.||:.:..   .||.:|.
  Fly   285 TIPSLLLILNCYLMSESPRWLITNQRYDRVYKILFRQPSHYQIQPAVAAPSQVASDKKSLEPEEG 349

Mouse   322 NSLKQQ------KVIILDLFRTRNIATITVMAVMLWMLTSVGYFALSLNVPNLHGDVYLNCFLSG 380
            .|..|:      |.|| :|:....:..:...:..::.:||:.|:..:||..||....||....:|
  Fly   350 FSFGQKLKNGPLKSII-ELYANSKVRRMIFASYFMFCVTSLSYYVTALNAANLSVSRYLYIIGTG 413

Mouse   381 LIEVPAYFTAWLLLRTLPRRYIIAGVLFWGGGVLLLIQVVPEDYNFVSIGLVMLGKFGITSAFSM 445
            |:::|:|....::||...||.....:..|.|..|||:..||.......:...|||:|||::.:|:
  Fly   414 LVDIPSYLVPVIMLRFTGRRLTTMFLFLWTGVSLLLVLAVPAGSTTWIVAFAMLGRFGISATYSV 478

Mouse   446 LYVFTAELYPTLVRNMAVGITSMASRVGSIIAPYFV-YLGAYNRLLPYILMGSLTVLIGIITLFF 509
            :.::|||||||.:||.|:|..|..:.||||.|||.| .|||....:|..:.|...::.|::||..
  Fly   479 VTLYTAELYPTQIRNSALGTCSTFAHVGSISAPYVVDVLGALGWYIPTTICGCCVLVAGLLTLTL 543

Mouse   510 PESFGVTLPENLE 522
            ||:....|.:.:|
  Fly   544 PETGTGKLSDKVE 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc22a4NP_062661.1 2A0119 12..519 CDD:273328 150/527 (28%)
MFS 123..510 CDD:119392 123/404 (30%)
CG6356NP_651240.1 MFS 167..544 CDD:119392 118/382 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843838
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.940

Return to query results.
Submit another query.