DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc22a4 and CarT

DIOPT Version :9

Sequence 1:NP_062661.1 Gene:Slc22a4 / 30805 MGIID:1353479 Length:553 Species:Mus musculus
Sequence 2:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster


Alignment Length:562 Identity:171/562 - (30%)
Similarity:292/562 - (51%) Gaps:36/562 - (6%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 DYDEVIAFLGEWGPFQRLIFF-LLSASIIPNGFNGMSVVFLAGTP-EHRCLVPDTVNLSSSWRNH 65
            |.|:::..:||:|.:|:|:.| :...:.||.||...:.:|:|.|| ::.|.:|:.::|....|..
  Fly    35 DLDDLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQLFMADTPDDYWCRIPELLDLPLEQRKS 99

Mouse    66 -SIPLETKDGRQVPQSCRRYRLATIANFSAMGLEPGQDVDLEQLEQES------CLDGWEYDKDI 123
             |||.|..:...|...|..|.:    |::.: ||.|::.||..:|..:      |..||||:..:
  Fly   100 LSIPKELDNDELVYSKCYTYGV----NWTQL-LESGEEDDLTTMEPNASWPLIKCPQGWEYNTSV 159

Mouse   124 FLSTIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDRFGRKKVLFATMAVQTGFSFVQI 188
            ..|:||.:::|||:.|....:..:....|...|.::.|.|:||.||:...|..:|.....|.:..
  Fly   160 VWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATLLAGSLMTS 224

Mouse   189 FSTNWEMFTVLFAIVGMGQISNYVVAFILGTEILSKSVRIIFSTLGVCTFFAIGYMVLPLFAYFI 253
            .|.::..:.....|||:...:.|.:.||:..|::.::.| .|.|:..|||:..|.|:|....|..
  Fly   225 LSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYR-SFVTVMTCTFYTSGIMLLSGVTYLE 288

Mouse   254 RDWRMLLLALTLPGLFCVPLWWFI-PESPRWLISQRRFAEAEQIIQKAAKMNSIVAPAGIFDPLE 317
            |||..|....:|| .:...|:.|: |||||||:.:.|..||.:|:::.||:|....|..:...||
  Fly   289 RDWVRLSYITSLP-FYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVHLKLE 352

Mouse   318 LQ-ELNSLKQQK-----VIILDLFRTRNIATITVMAVMLWMLTSVGYFALSLNVPNLHGDVYLNC 376
            .| ..:.||:||     |.:.||.||.|:...|::..:.|......|..||...|.|..:.|::.
  Fly   353 AQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYYGPALGTNQYVSF 417

Mouse   377 FLSGLIEVPAYFTAWLLLRTLPRRYIIAGVLFWGGGVLLLIQVVPEDYNFVSIGLVMLGKFGITS 441
            |||.::|:|:|...|..:.|..||:.::..:..||...::..::|:|....::.|.::.|..:::
  Fly   418 FLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKALLSA 482

Mouse   442 AFSMLYVFTAELYPTLVRNMAVGITSMASRVGSIIAPYFVYLGAYNRLLPYILMGSLTVLIGIIT 506
            :|.::|.|..|||||.||.:.:|.:|....:|.|..|:..|||..|..||.::||.|::|.|:..
  Fly   483 SFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSMLGGMTG 547

Mouse   507 LFFPESFGVTLPENLEQMQKVRGF----------RCGKKSTV 538
            |..||:....||:.:|:.::   |          ||.:|..:
  Fly   548 LRLPETLHHRLPQTIEEGEE---FGKNWQFKDCCRCAQKPEI 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc22a4NP_062661.1 2A0119 12..519 CDD:273328 163/522 (31%)
MFS 123..510 CDD:119392 123/393 (31%)
CarTNP_610052.1 2A0119 44..561 CDD:273328 164/523 (31%)
MFS 182..551 CDD:119392 116/370 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I9078
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 1 1.010 - - D375160at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.930

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