DRSC/TRiP Functional Genomics Resources

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Protein Alignment hic1l and CG10321

DIOPT Version :9

Sequence 1:NP_571558.2 Gene:hic1l / 30771 ZFINID:ZDB-GENE-030620-1 Length:454 Species:Danio rerio
Sequence 2:NP_001261124.1 Gene:CG10321 / 37464 FlyBaseID:FBgn0034643 Length:855 Species:Drosophila melanogaster


Alignment Length:312 Identity:60/312 - (19%)
Similarity:95/312 - (30%) Gaps:118/312 - (37%)


- Green bases have known domain annotations that are detailed below.


Zfish   212 EEKLIKPLDGA----------------QERKRERSQRKSNFNGCIPLCRVGSQLSQNQTFTF--- 257
            |..:::|.||.                .::.:|..|..|..|..:       :.||..|.|.   
  Fly   474 EYSIMEPPDGETSVDIDQAFMDSEQSHHQQHQEEMQSISLENAVV-------EFSQATTTTEALV 531

Zfish   258 --QMSVKKEEDIEGKTDETDGQNPIGCT------------------------NFVYQKETFVKDA 296
              .|:|........:...::.|.|.|.|                        ..:.|..:.:..|
  Fly   532 GPTMTVSSASPTPKRAKRSNHQIPAGVTLEPCDHQPPAAGSTTSSKLAAANSRQLVQTASVIAAA 596

Zfish   297 GIDN-----------------------RYVCIPCEKGFPSSESLKSHVESHFDDDLDVRVEDEEE 338
            |.|:                       ||:|..|...|...:.|::|:.||              
  Fly   597 GADDNYEIDANLVTEFIRQHTSPLGSGRYICHLCSTEFRQFKGLQNHMHSH-------------- 647

Zfish   339 EESDGVTRISKEAPEHLEPSPNKSLKDVDLLRPFPCNICGKMFTQRGTMTRHMRSH--LSLKPFA 401
              ::.:....|:.|:                    |.||.|.|...|.:..||::|  .|..|. 
  Fly   648 --TNWIRANCKKQPQ--------------------CQICLKSFKGPGMLRMHMKTHDAESSTPM- 689

Zfish   402 CEECGMRFTRQYRLTEHMRVHSGEKPYACQV--CGGKFTQQRNLISHM-RMH 450
            |..|...|..:..|..|.:.|. ::.|.|.|  |...|:...||..|: |.|
  Fly   690 CTICNRTFKSKAILYRHRQTHQ-QRAYCCGVANCRKNFSSAVNLKWHVERKH 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hic1lNP_571558.2 BTB 18..119 CDD:306997
C2H2 Zn finger 304..324 CDD:275368 5/19 (26%)
zf-C2H2 372..394 CDD:306579 8/21 (38%)
C2H2 Zn finger 374..394 CDD:275368 8/19 (42%)
zf-H2C2_2 387..411 CDD:316026 8/25 (32%)
C2H2 Zn finger 402..422 CDD:275368 5/19 (26%)
zf-H2C2_2 414..439 CDD:316026 8/26 (31%)
C2H2 Zn finger 430..450 CDD:275368 8/22 (36%)
CG10321NP_001261124.1 zf-AD 12..80 CDD:214871
ASF1_hist_chap <405..516 CDD:304562 7/41 (17%)
C2H2 Zn finger 627..647 CDD:275368 5/19 (26%)
C2H2 Zn finger 661..681 CDD:275368 8/19 (42%)
C2H2 Zn finger 690..710 CDD:275368 5/19 (26%)
C2H2 Zn finger 717..740 CDD:275368 8/22 (36%)
C2H2 Zn finger 750..767 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24399
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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