DRSC/TRiP Functional Genomics Resources

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Protein Alignment tal1 and HLH4C

DIOPT Version :9

Sequence 1:NP_998402.1 Gene:tal1 / 30766 ZFINID:ZDB-GENE-980526-501 Length:324 Species:Danio rerio
Sequence 2:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster


Alignment Length:146 Identity:52/146 - (35%)
Similarity:68/146 - (46%) Gaps:36/146 - (24%)


- Green bases have known domain annotations that are detailed below.


Zfish   107 PLPPRDPLSDTRMVQLSPPAFPLPARAMLYSNMTTPLATINSGFAGDAEQYGMYPSNRVKRRPAP 171
            |.||             ||..|.|.|      .|||:|.::     .:|..|:....|.:||.|.
  Fly    66 PAPP-------------PPPTPAPRR------RTTPIAHLD-----PSELVGLSREERRRRRRAT 106

Zfish   172 YEVEINDGSQPKIVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINF 236
            .:.            |....:|||.|.:..|.:|||||||:||.||||||||.|||:||:.||.:
  Fly   107 LKY------------RTAHATRERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEILKLAICYIAY 159

Zfish   237 LAKLLNDQDDMVGGEA 252
            |..:|....|..|..:
  Fly   160 LNHVLETPXDSAGASS 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tal1NP_998402.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
HLH 191..241 CDD:197674 30/49 (61%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 276..324
HLH4CNP_001259243.1 HLH 108..165 CDD:238036 31/68 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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