DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tie1 and Cad96Ca

DIOPT Version :9

Sequence 1:XP_001334673.5 Gene:tie1 / 30746 ZFINID:ZDB-GENE-990415-55 Length:1122 Species:Danio rerio
Sequence 2:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster


Alignment Length:744 Identity:205/744 - (27%)
Similarity:302/744 - (40%) Gaps:193/744 - (25%)


- Green bases have known domain annotations that are detailed below.


Zfish   517 EGPLGPEAIM-----------ETDCPEPTARP-EIDSSSLEGRNVTLRWSLIGRFREASGFLVQL 569
            |.|.|.:.|.           |.|...|...| :||.   |...|||..||.|  |....||:.:
  Fly    82 EDPDGDDLIFGIEPRFSLPGGENDASPPEKIPFQIDR---ETGVVTLNESLAG--RAGQNFLIYI 141

Zfish   570 YGPYGEKLWEETTFLNVLSVKLYNLEYHKNYQAVVRLVNCGSHGPPSRPHHIHIYKQ-------- 626
            ....|....:...|:|:|..:    |....|:....:.|.           :|...|        
  Fly   142 TVTDGSYTAKNEVFINILGER----ENSSGYRPQTSISNV-----------VHNISQFLPRFDQL 191

Zfish   627 -GPSSPRNVQADALSISAVRLRWQPPEDPNG--GIVKYSIEYQPV--------GQSS-------- 672
             |..|.||...::....     |.||...|.  |...:...|.|.        |:.|        
  Fly   192 PGVQSIRNGLPNSRPGG-----WYPPVPQNNIFGPPPFGNNYPPPPPNIPGVRGEQSGEEEQPDE 251

Zfish   673 -LHPWVDTDNGNKTTKDVTSL-----NGSTLYQFRVRAFSKVPGEWSSFVQAQTP--GEGLSSFI 729
             :.|.......:.|.|..|.|     |.||      |..|.:|.|      ..||  |...:|..
  Fly   252 EVTPTTPVRISSTTPKSRTKLTPITANNST------RVESAIPAE------TTTPSGGHHNNSSS 304

Zfish   730 PTTQQVGRPLAEDHQLLFAVVGSVAVTCVT-----ILLALLALFYIRKSVLKRRRTF-------- 781
            |.|             :|::........||     :.:|:|..:..|:.:....||.        
  Fly   305 PIT-------------IFSLKSGTIPIVVTVGGFFVAIAVLLAYLCRRRLCAISRTLKKTKEKEE 356

Zfish   782 ------------TYQSGSGEETILQFNSGTLTLTRR----------------------------- 805
                        |....|....::|...|.:....|                             
  Fly   357 LAKKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMGIATSQLSTGVTNGGVSSP 421

Zfish   806 PKPSP---EP--------LT----------------YPILEWE----DIKFEDVIGEGNFGQVIK 839
            ..|||   ||        ||                .....||    .:||.:::|||.||||.:
  Fly   422 GVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCDRWEFPRYRLKFFNILGEGAFGQVWR 486

Zfish   840 AMVK----KDGIKMSAAIKMLKEFASENDHRDFAGELEVLCKLGQHTNIINLIGACENRGYLYIA 900
            ....    .:|| .:.|:|.|||.|:|.|.:|...||||:..|..|.|:::|:|.|.::...::.
  Fly   487 CEATNINGNEGI-TTVAVKTLKESATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKDPTFVI 550

Zfish   901 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFAADVATGMHYLSDKQFIHRDLA 965
            :||...|.|..:||.||   .:..:...||.::.|||..|..|...||.||.||:.:..||||||
  Fly   551 LEYVNRGKLQTYLRSSR---AERHYGNTHGKSNVLTSCDLTSFMYQVAKGMDYLTSRGIIHRDLA 612

Zfish   966 ARNVLVGDNLVAKIADFGLSRG---EEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLL 1027
            |||:|:.|:...|:||||.:|.   .::|.:|:.|:||:||||.|||..::::.|||:||||:|:
  Fly   613 ARNILITDDHTCKVADFGFARDVITSKIYERKSEGKLPIRWMATESLYDNIFSVKSDIWSFGILM 677

Zfish  1028 WEIVSLGGTPYCGMTCAELYEKLPQGYRMEQPRNCDDEVYELMRQCWRDRPYERPPFSQISVQLN 1092
            ||||:||.|||.|::.|::..|:..|||:|:|.:|..|:|.:|..||...|.|||.|::|...|:
  Fly   678 WEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLFAEIIQMLD 742

Zfish  1093 RMQEARKAYVNMALFENFTYAGIDATAEE 1121
            ::......|:.:..|.:..|..|.:.:.|
  Fly   743 KLLHTEMDYIELERFPDHNYYNIVSLSGE 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tie1XP_001334673.5 EGF_CA <219..244 CDD:238011
IG_like 346..431 CDD:214653
fn3 <461..508 CDD:278470
fn3 538..616 CDD:278470 19/77 (25%)
FN3 628..720 CDD:238020 24/115 (21%)
PKc_like 820..1116 CDD:304357 123/306 (40%)
Pkinase_Tyr 823..1091 CDD:285015 117/274 (43%)
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 24/90 (27%)
STYKc 470..741 CDD:214568 117/274 (43%)
PTKc 474..742 CDD:270623 115/271 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006344
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.