Sequence 1: | XP_009298008.1 | Gene: | elavl3 / 30732 | ZFINID: | ZDB-GENE-980526-76 | Length: | 366 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259974.1 | Gene: | Rbp9 / 33498 | FlyBaseID: | FBgn0010263 | Length: | 684 | Species: | Drosophila melanogaster |
Alignment Length: | 365 | Identity: | 214/365 - (58%) |
---|---|---|---|
Similarity: | 258/365 - (70%) | Gaps: | 29/365 - (7%) |
- Green bases have known domain annotations that are detailed below.
Zfish 13 SNGPSGTSLPNGPVISTNGATDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQ 77
Zfish 78 SLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQ 142
Zfish 143 LFSQYGRIITSRILVDQVTAGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFANNPS 207
Zfish 208 QKTGQALLTQLYQTAARRYTGPLHHQTQRFRLDNLLNASYGVKSSL-------------SVLPRF 259
Zfish 260 SPITIDSMTSLAGVNLTGPT--GAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNK 322
Zfish 323 CKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 362 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
elavl3 | XP_009298008.1 | ELAV_HUD_SF | 35..365 | CDD:273741 | 211/343 (62%) |
RRM1_Hu | 37..114 | CDD:241094 | 59/76 (78%) | ||
RRM_SF | 119..209 | CDD:302621 | 62/89 (70%) | ||
RRM3_HuC | 282..366 | CDD:241099 | 64/81 (79%) | ||
Rbp9 | NP_001259974.1 | ELAV_HUD_SF | 107..438 | CDD:273741 | 211/343 (62%) |
RRM1_Hu | 109..186 | CDD:241094 | 59/76 (78%) | ||
RRM2_Hu | 196..274 | CDD:241096 | 54/78 (69%) | ||
RRM3_Hu | 355..432 | CDD:240823 | 60/76 (79%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 123 | 1.000 | Domainoid score | I5514 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0145 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 414 | 1.000 | Inparanoid score | I1806 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D425303at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000313 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6531 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103306 | |
Panther | 1 | 1.100 | - | - | O | PTHR10352 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X326 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.830 |