DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cntn2 and Nrg

DIOPT Version :9

Sequence 1:NP_571521.1 Gene:cntn2 / 30726 ZFINID:ZDB-GENE-990630-12 Length:1040 Species:Danio rerio
Sequence 2:NP_001245581.1 Gene:Nrg / 31792 FlyBaseID:FBgn0264975 Length:1309 Species:Drosophila melanogaster


Alignment Length:1064 Identity:284/1064 - (26%)
Similarity:467/1064 - (43%) Gaps:126/1064 - (11%)


- Green bases have known domain annotations that are detailed below.


Zfish     2 RMRILLCLLSLSFLALSNALGGDVCESGHDSGPVFEEQPS--SLIYPEGM----PEGKVTLGCQA 60
            |...:|..|.::.|...:|      ||..:..|...:||:  .|::....    .:....:.|:|
  Fly     3 RQSTILAALLVALLCAGSA------ESKGNRPPRITKQPAPGELLFKVAQQNKESDNPFIIECEA 61

Zfish    61 RSSPAAVYRWRVNGTDISFAEESHYTQV-----AGNLVINNPQNGRDGGSYQCLAINRCGTIVSR 120
            ...|...|.|..||.  .|..:::..::     .|.|||..|:: .|.|.|||.|.|..||..|.
  Fly    62 DGQPEPEYSWIKNGK--KFDWQAYDNRMLRQPGRGTLVITIPKD-EDRGHYQCFASNEFGTATSN 123

Zfish   121 VANLKFGYLRDFPPESRSPQTVHEGMGTFLACQPPAHYPALSYRWFINEFPN-----------FI 174
            ...::...|..|..|:.......||....|.|..|..:|:.:..|.|.|..:           .:
  Fly   124 SVYVRKAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFPSPTVNWMIQESIDGSIKSINNSRMTL 188

Zfish   175 QPEAGRWFVSQVTGNLYLANARANDTGN--YFCFTTINMDVSTKSIFSKAV----QLTVHPDASP 233
            .||          |||:.:|....|..:  |:..:..::..|...|.:|.:    |:.|  .||.
  Fly   189 DPE----------GNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLLDVKQMGV--SASQ 241

Zfish   234 RKTAPNIRVRFPAETYALSGQTAQLECFAYRNPIPKIRWRK-------VDGILPPKVGTSVDGPI 291
            .|..|..:.....::.||.|:..:|.|.....|:|:..|.|       .|.|.....|.|     
  Fly   242 NKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKS----- 301

Zfish   292 LIIPELNFDDEGMYECEVYNSEGR-ETHQGRVSVQAQPDWLQVMSDSEVEISS-----ELQWSCA 350
            |:|.:.||||.|.|.|:|.|..|. ::....::|.:.|.:.:     |.||::     |:.:.|.
  Fly   302 LVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILNVNSVPYFTK-----EPEIATAAEDEEVVFECR 361

Zfish   351 AAGKPRPTIRWLRNGHAL---ITQDRVEVNNGRLKIANLALEDSGMYQCVAENKHSTIYSNAELR 412
            |||.|.|.|.|:.||..:   ....|..|.:..::|.||...|:|.|.|.|.|....:|.:..|.
  Fly   362 AAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLN 426

Zfish   413 VQVQAPDFRLNPVRKLVPAARGGQVKMECKPRAAPKPTLFWSRGTELLTNSTRITVTPDGILWIY 477
            ||.:.|.....|.  .|....|..|.::|:...:|||.:.|.|.:..||.. |..|..:|.|.|.
  Fly   427 VQAEPPTISEAPA--AVSTVDGRNVTIKCRVNGSPKPLVKWLRASNWLTGG-RYNVQANGDLEIQ 488

Zfish   478 NISRADEGKYTCFAENYLGKANSTGHLSVRDATKITLAPSNADINQGENATLQCHASHDPTMDLT 542
            :::.:|.|||||:|:|..|:..:.|.|.|::.|:||..|.|.::..|::||.:|:.:||.|:::.
  Fly   489 DVTFSDAGKYTCYAQNKFGEIQADGSLVVKEHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIE 553

Zfish   543 FTWSLNGVPLDLEEPNGHYRRMEGKETIGDLVIVNGQLSHAGTYTCTAQTVVDSAMASAKLVVRG 607
            ..|..:|..:|.|......:..:...||...:.::     :|.|||.|:|.:|.|.|.|.|:|:.
  Fly   554 IDWWKDGQSIDFEAQPRFVKTNDNSLTIAKTMELD-----SGEYTCVARTRLDEATARANLIVQD 613

Zfish   608 PPGPPGGLVVTSVNDTSVELRWSRGYDNHSPIGKYVILGRSSQTHDWKRMRTDPANIEG------ 666
            .|..|....:|...| ..|:.|.:..||.|||..|.|...:|.|         ||:.:.      
  Fly   614 VPNAPKLTGITCQAD-KAEIHWEQQGDNRSPILHYTIQFNTSFT---------PASWDAAYEKVP 668

Zfish   667 NAESARVIDLRPWMDYEFQVIASNILGSGEPSMPSPRAQTKEAAPTVAPSGLGGGGGNRNELIIT 731
            |.:|:.|:.:.||.:|.|:|||.|.:|:..||..|....|:...|...|..:.|.|...|.|:|:
  Fly   669 NTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVIS 733

Zfish   732 WTPMAREYQNGDSFGYILAFRKQGIP--TWTVVKVPNVESSRYVYSNDSLTAYCPFEVRIKAYNK 794
            ||||.....|..:|.|.::: |:.||  .|....:.:...:..|.::.  ..:..:.:::.|.|.
  Fly   734 WTPMPEIEHNAPNFHYYVSW-KRDIPAAAWENNNIFDWRQNNIVIADQ--PTFVKYLIKVVAIND 795

Zfish   795 KGEGPFSQIAVV-HSAEEEPTVSPRWINATALTAFEI------QVSWEPIQHLNINGVLRGYEIR 852
            :||...:...|| :|.|:.|..:|     |..|..:|      .::|.|:...::.|..:||:|:
  Fly   796 RGESNVAAEEVVGYSGEDRPLDAP-----TNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQ 855

Zfish   853 YWRQHEREAAADRVRTAGLENTARVTGLRPNTLYHITVLAYNSAGTGPASPRTTVITKKPPPNRP 917
            .|.::|.|.....:...|..:.|.||..:|::..:..:||||....||.|......|.:..|:..
  Fly   856 TWTENEGEEGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDTPEGVPSPV 920

Zfish   918 PGNVSWKVDGSWVTVRWDHVKSMDNESAVLGYKVLYKHEGQSAL--------KVLEKSKTSVKLP 974
            .|..::.:..|...:.|.  |.:.....:.|||:.|:...:|.:        .:.:...|.:|:.
  Fly   921 QGLDAYPLGSSAFMLHWK--KPLYPNGKLTGYKIYYEEVKESYVGERREYDPHITDPRVTRMKMA 983

Zfish   975 LPKDNGYVVLEIRSWGDGGDGAAH 998
            ..|.|....:.|.:....|:|:.|
  Fly   984 GLKPNSKYRISITATTKMGEGSEH 1007

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cntn2NP_571521.1 Ig1_Contactin-2 33..126 CDD:143258 27/103 (26%)
I-set 34..125 CDD:254352 27/101 (27%)
Ig 128..225 CDD:299845 23/113 (20%)
IG_like 138..227 CDD:214653 21/105 (20%)
Ig 238..325 CDD:299845 26/94 (28%)
IG_like 245..324 CDD:214653 25/86 (29%)
Ig 329..413 CDD:299845 27/91 (30%)
IG_like 335..413 CDD:214653 27/85 (32%)
IG_like 429..506 CDD:214653 27/76 (36%)
Ig5_Contactin_like 434..506 CDD:143170 26/71 (37%)
I-set 511..605 CDD:254352 28/93 (30%)
Ig6_Contactin-2 525..606 CDD:143262 23/80 (29%)
FN3 615..702 CDD:238020 29/92 (32%)
FN3 714..806 CDD:238020 22/93 (24%)
FN3 817..909 CDD:238020 25/97 (26%)
FN3 917..1002 CDD:238020 17/90 (19%)
NrgNP_001245581.1 Ig 55..128 CDD:299845 23/75 (31%)
IG_like 57..127 CDD:214653 23/72 (32%)
Ig 135..214 CDD:299845 19/88 (22%)
IG_like 141..216 CDD:214653 17/84 (20%)
ig 251..332 CDD:278476 25/85 (29%)
I-set 339..427 CDD:254352 28/92 (30%)
Ig 354..427 CDD:299845 24/72 (33%)
I-set 432..517 CDD:254352 29/87 (33%)
Ig 446..517 CDD:299845 26/71 (37%)
I-set 522..611 CDD:254352 28/93 (30%)
ig 525..609 CDD:278476 25/88 (28%)
FN3 613..707 CDD:238020 32/103 (31%)
FN3 716..807 CDD:238020 22/93 (24%)
fn3 817..905 CDD:278470 24/92 (26%)
FN3 917..1004 CDD:238020 16/88 (18%)
FN3 1041..1111 CDD:238020
Bravo_FIGEY 1155..>1221 CDD:290593
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3513
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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