DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cse1l and Cse1

DIOPT Version :9

Sequence 1:NP_958858.1 Gene:cse1l / 30707 ZFINID:ZDB-GENE-990603-1 Length:971 Species:Danio rerio
Sequence 2:NP_523588.2 Gene:Cse1 / 35016 FlyBaseID:FBgn0022213 Length:975 Species:Drosophila melanogaster


Alignment Length:983 Identity:510/983 - (51%)
Similarity:692/983 - (70%) Gaps:22/983 - (2%)


- Green bases have known domain annotations that are detailed below.


Zfish     1 MELNDGNLQTLTEYLQKTLSADPAVRRPAEKFLESVEGNQNYPILLLTVLEKSQNEV-IRVCSAV 64
            ||:.:.|||.|..|||:||||||.|||||||.|||.|..||||||||.:::|:|.:: .||..|:
  Fly     1 MEVTEANLQLLAGYLQQTLSADPNVRRPAEKLLESTELQQNYPILLLNLIDKAQMDMTTRVAGAI 65

Zfish    65 TFKNYIKRNW--RIVEDEPNKISDPDRTAIKANIVNLMLTSPEQIQKQLSDAISIIGREDFPLKW 127
            .|||||||||  .:..|.|::|.:.||..||..||.|||.||..:|||||||:||||:.|||.||
  Fly    66 AFKNYIKRNWAAHLDSDGPDRIHESDRNTIKTLIVTLMLHSPVALQKQLSDAVSIIGKYDFPKKW 130

Zfish   128 PDLLTEMVNRFQSGDFHIINGVLRTAHSLFKRYRHEFKSNELWSEIKLVLDTFAQPLTELFKATI 192
            |.|:.|||.||.||||::|||||:||||||||||:||||..||.|||.|||..|:|||:|.:||:
  Fly   131 PQLIDEMVERFASGDFNVINGVLQTAHSLFKRYRYEFKSQALWEEIKFVLDRMAKPLTDLLQATM 195

Zfish   193 ELCQTHATDINALKVLFSSLTLISKLFYSLNFQDLPEFFEDNMETWMTNFHNLLTLDNKLLQTDD 257
            :|.:.|..:..||||::.||.|::|:|:|||.||||||||||:.|||..|...|..|...|:|.|
  Fly   196 QLTKVHENNAGALKVIYGSLVLVNKVFFSLNSQDLPEFFEDNINTWMGAFIQQLAADVPSLRTAD 260

Zfish   258 EEEAGLLELLKSQICDNAALYAQKYDEEFQPYLPRFVTAIWNLLVTTGQEVKYDLLVSNAIQFLA 322
            :|:||:||.|::|:|:|..|||:||||||:|::.:||||:|.|||.|....|||.|||:|:|||:
  Fly   261 DEDAGVLEHLRAQVCENICLYAKKYDEEFKPFMEQFVTAVWELLVKTSLHTKYDSLVSHALQFLS 325

Zfish   323 SVCERPHYKHLFEDQNVLTSICEKVIVPNMEFRSADEEAFEDNSEEYIIRDLEGSDIDTRRRAAC 387
            .|.:|.||:.:||:..:|..||:||::||::.|.:|||.|||:.||||.||:|||||||||||||
  Fly   326 VVADRQHYQSIFENPEILAQICDKVVIPNLDIRPSDEEIFEDSPEEYIRRDIEGSDIDTRRRAAC 390

Zfish   388 DLVRGLCKFFEGPVTGIFSGYVNSMLAEYAKNPGVNWKHKDAAIYLVTSLASKAQTQKHGITQAN 452
            |||:.|...||..:.|||..|:..:|.:|.:||..||:.||.|||||||.||:..||||||||.:
  Fly   391 DLVKTLSINFEQKIFGIFGQYLERLLTKYKENPATNWRSKDTAIYLVTSWASRGGTQKHGITQTS 455

Zfish   453 ELVNLSEFFLNHILIDLKSPNVNEFPVLKSDAIKYVMTFRSQLPKEQLLQAVPLLVSHLQAESIV 517
            |||.|.||....|:.:|:.||:|||||||:.||||||.|||.|..:.|...:|.|:.||.|||.|
  Fly   456 ELVPLPEFCAQQIIPELERPNINEFPVLKAAAIKYVMVFRSILGPQVLASCLPQLIRHLPAESSV 520

Zfish   518 QHTYAAHALERLFTMRGGNNTTLITPTEMAPFTEQLLNHLFKALAIPGSSENEYIMKAIMRSFSL 582
            .|:|||.::|::.:||..:|..:..|..:||:|.:|::.||..|::|||.||||:|||||||||:
  Fly   521 VHSYAACSVEKILSMRDASNAIVFGPQILAPYTTELISGLFATLSLPGSGENEYVMKAIMRSFSV 585

Zfish   583 LQEAIVPYIPTLIGQLTHKLLLVSKNPSKPHFNHYLFESLCLSIRITCKANPDTVSSFEEALFPV 647
            ||.|.:|::...:.:||..|..|:||||:|.|||||||:|.|.|:|.|.|:...|||||||||||
  Fly   586 LQSAAMPFMGVALPRLTEILTQVAKNPSRPQFNHYLFETLALCIKIVCHADSSAVSSFEEALFPV 650

Zfish   648 FTEILQNDVQEFVPYVFQVMSLLLEIH--SNSIPSSYMALFPHLLQPVLWERTGNIPPLVRLLQA 710
            |..|||.|:.||:|||||::|:|||:.  :.:||..|.||||.||.|.||:||||:.||:||:.|
  Fly   651 FQGILQQDIVEFMPYVFQMLSVLLEMREGTGTIPEPYWALFPCLLSPALWDRTGNVTPLIRLISA 715

Zfish   711 YLEKGAAAIANTASDKIPGLLGVFQKLIASKANDHQGFYLLNSIVEHMPAEAITQYRKQIFILLF 775
            ::::|:|.|  .|..|:.|:||:|||:||||||||:|||||.:::.:.|...|....:|||.|||
  Fly   716 FIKQGSAQI--QALGKLSGILGIFQKMIASKANDHEGFYLLQNLLSYYPPAEIQTNLRQIFGLLF 778

Zfish   776 QRLQSSKTTKFVKSFLVFINLYSVKYGAIALQEIFDDIQPKMFGMVVEKIVIPEVQKVSGQVEKK 840
            |||..|||.|::...::|.:.|.:|:....:.::.|:|||.:|||:::::.|.|:.|:..:.::|
  Fly   779 QRLSLSKTPKYLSGIIIFFSFYVIKFSGSQMAQLIDEIQPNLFGMLLDRVFITEMGKIPKEQDRK 843

Zfish   841 ICAVGIIKILTECPAMMDTEYTKLWAPLLQALIGLFELPEDDSIPDDEHFIDIEDT--------P 897
            :.|||:.|:|||.|.::..:|...|..||.:||.|||.|     |:....::|.:|        .
  Fly   844 MVAVGVTKLLTETPEILQQQYATFWPRLLHSLIDLFERP-----PEKLMGLEIGETAGVAEDPDA 903

Zfish   898 GYQTAFSQLAFAGKKEHDPIGDAVSNPKILLAQSLHKLSTACPGRVPSMLSTSLPTEALQFLQGY 962
            |||.||:||..|...:.|.:.: :.:.:..||.||.|.:.|..|...::|| .|..|..|.||.|
  Fly   904 GYQVAFAQLTHAQPNQQDHLAE-IKDARQFLATSLSKFAQARAGEFSTLLS-PLEPEYKQVLQKY 966

Zfish   963 LQAATVQL 970
            ...|.|::
  Fly   967 CDQAGVRI 974

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cse1lNP_958858.1 IBN_N 29..102 CDD:197981 40/75 (53%)
Cse1 156..525 CDD:285678 210/368 (57%)
CAS_CSE1 527..962 CDD:281384 199/444 (45%)
Cse1NP_523588.2 IBN_N 29..105 CDD:281761 40/75 (53%)
Cse1 159..528 CDD:285678 210/368 (57%)
CAS_CSE1 530..966 CDD:281384 199/444 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586403
Domainoid 1 1.000 430 1.000 Domainoid score I571
eggNOG 1 0.900 - - E1_COG5657
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1006
Inparanoid 1 1.050 998 1.000 Inparanoid score I290
OMA 1 1.010 - - QHG53855
OrthoDB 1 1.010 - - D1248958at2759
OrthoFinder 1 1.000 - - FOG0004998
OrthoInspector 1 1.000 - - oto40878
orthoMCL 1 0.900 - - OOG6_101888
Panther 1 1.100 - - LDO PTHR10997
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4827
SonicParanoid 1 1.000 - - X3532
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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