DRSC/TRiP Functional Genomics Resources

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Protein Alignment nkx2.7 and bap

DIOPT Version :9

Sequence 1:NP_571494.1 Gene:nkx2.7 / 30694 ZFINID:ZDB-GENE-990415-179 Length:269 Species:Danio rerio
Sequence 2:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster


Alignment Length:322 Identity:93/322 - (28%)
Similarity:121/322 - (37%) Gaps:108/322 - (33%)


- Green bases have known domain annotations that are detailed below.


Zfish     8 STPFSVKDIL----------------------------------------------KLEQQQALN 26
            :||||:.|||                                              ||.|.:.:.
  Fly    21 TTPFSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCRDLGLYKLTQPKEIQ 85

Zfish    27 PGVFMGVEQDSVPLQ--------------------SLQLQCMQNTLSRSLDLLYSPEKGIPGEQV 71
            |    ...|.|..||                    |.....||..|:     .:......|.:..
  Fly    86 P----SARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLA-----YFGSTLAAPLDMR 141

Zfish    72 KCDDFDIVRSSCGSPTEEEMDANEETSMCPFTDSSYSSKNGETLREKPKQRLRRKPRVLFSQTQV 136
            :|...|   |.|.||.......:|          |..|.:|..|..|      ::.|..||..||
  Fly   142 RCTSND---SDCDSPPPLSSSPSE----------SPLSHDGSGLSRK------KRSRAAFSHAQV 187

Zfish   137 FELERRFKQQRYLSAPERDHLALALKLTSTQVKIWFQNRRYKCKRQ--RQDKSLELAGPRRVAVP 199
            |||||||.||||||.|||..:|.:|:||.|||||||||||||.||:  :|.::..|...:||.|.
  Fly   188 FELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKRVPVQ 252

Zfish   200 VLVR-DGKPCH------GAPYNVTVSYPYNNYYN----SYGNNPYHCNFTSVPSFANTSQIP 250
            |||| ||...:      ||.:.:..:. .|.|.:    :||..|........|.|....::|
  Fly   253 VLVREDGSTTYAHMAAPGAGHGLDPAL-INIYRHQLQLAYGGLPLPQMQMPFPYFYPQHKVP 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nkx2.7NP_571494.1 COG5576 87..210 CDD:227863 57/131 (44%)
Homeobox 127..180 CDD:278475 38/52 (73%)
bapNP_732637.1 Homeobox 178..231 CDD:278475 38/52 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0842
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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