Protein Alignment raraa and Eip75B

DIOPT Version :9

• Sequence 1: XP_005156109.1
• Gene: raraa / 30680
• ZFINID: ZDB-GENE-980526-284
• Length: 447
• Species: Danio rerio
• Sequence 2: NP_001246821.1
• Gene: Eip75B / 39999
• FlyBaseID: FBgn0000568
• Length: 1412
• Species: Drosophila melanogaster
• Alignment Length: 521
• Identity: 154/521 - (29%)
• Similarity: 235/521 - (45%)
• Gaps: 111/521 - (21%)

Zfish    28 GGLSPPSLPTLPLSGYSTPS----PATIETQSTSSEEIVPSPPSPPPPPRI-------------- 74
            ||.|...:...|:...|:.|    ....:.|.:|....|..||.|||||::
  Fly   364 GGSSSSHIFRTPVVSSSSSSNMHHQQQQQQQQSSLGNSVMRPPPPPPPPKVKHASSSSSGNSSSS 428

Zfish    75 -----------YKP---------------CFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVY- 112
                       .:|               |.||.||:||:||||.:|||||||||||||:.:.|
  Fly   429 NTNNSSSSSNGEEPSSSIPDLEFDGTTVLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYR 493

Zfish   113 TCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKEEK----KPECTEN------ 167
            .|.:.:.|.|.::.|||||||||:||:.||||:::||..|..|:::.:    ..:.|:|
  Fly   494 PCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRA 558

Zfish   168 -YTLSPDTEQMIDRVRKAHQETFPSLCQLGKYTTSNSSER-----------------RVALDVDL 214
             .|...|..:::..|.:||.||    |:..|...|...:|                 ..|.::..
  Fly   559 LATELDDQPRLLAAVLRAHLET----CEFTKEKVSAMRQRARDCPSYSMPTLLACPLNPAPELQS 619

Zfish   215 WDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDG 279
            ..:||:.....|...::||..:|||..||..|:.|||||...|.|.:|:...:....:::...:|
  Fly   620 EQEFSQRFAHVIRGVIDFAGMIPGFQLLTQDDKFTLLKAGLFDALFVRLICMFDSSINSIICLNG 684

Zfish   280 LTLNRTQMH---NAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQADKVDVL 341
            ..:.|..:.   ||.|  |.|..|.||.::..:.:.|||.||..||.|:..||..|...:.::.:
  Fly   685 QVMRRDAIQNGANARF--LVDSTFNFAERMNSMNLTDAEIGLFCAIVLITPDRPGLRNLELIEKM 747

Zfish   342 QEPLLEALKIYVRNRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLEN 406
            ...|...|:..|...||.:|....|:|..:.|||::|....|:::..:.|    ...|:::.:.:
  Fly   748 YSRLKGCLQYIVAQNRPDQPEFLAKLLETMPDLRTLSTLHTEKLVVFRTE----HKELLRQQMWS 808

Zfish   407 SEGLESSSGAQ-----GSRA------SATTP-GSCSPSL-------SPNSAQ------SSPPTQS 446
            .|...:|.|.|     ||.|      :|.:| ||.|.:.       ||:|:|      .|||.|.
  Fly   809 MEDGNNSDGQQNKSPSGSWADAMDVEAAKSPLGSVSSTESADLDYGSPSSSQPQGVSLPSPPQQQ 873

Zfish   447 P 447
            |
  Fly   874 P 874

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
raraa	XP_005156109.1	NR_DBD_RAR	72..156	CDD:143522	48/124 (39%)
		NR_LBD_RAR	177..406	CDD:132735	65/248 (26%)
Eip75B	NP_001246821.1	NR_DBD_REV_ERB	453..541	CDD:143540	47/87 (54%)
		NR_LBD_REV_ERB	609..796	CDD:132738	54/188 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24082
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	3.010