Protein Alignment glra1 and SecCl

DIOPT Version :9

• Sequence 1: XP_005173152.1
• Gene: glra1 / 30676
• ZFINID: ZDB-GENE-991117-1
• Length: 459
• Species: Danio rerio
• Sequence 2: NP_001261986.1
• Gene: SecCl / 39949
• FlyBaseID: FBgn0036727
• Length: 509
• Species: Drosophila melanogaster
• Alignment Length: 522
• Identity: 141/522 - (27%)
• Similarity: 236/522 - (45%)
• Gaps: 114/522 - (21%)

Zfish     9 WETIVF-FSL-------AASQQAAARKAASPMPPSEFLDKLMGKVSGYDARIRPNFKVVDPQGSK 65
            |.|::. .|:       |..::..:...|..:..::.:.:|. .|..||...|| |:.      .
  Fly    11 WITLILVLSIWTSVGVKAEEEECPSMADAGSLQQTQLIQRLT-HVCRYDRLERP-FEY------D 67

Zfish    66 SDGTHKKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEY-PDDSLDLDPSML 129
            |||   |..|:.|...|::....::....:.::::..|:.::.|.||||..: ..|::.....:.
  Fly    68 SDG---KRLPIVVKTRIYVYFLQNLNSDLLQFKMHALLQLRFQDKRLAYKAFNRSDNILGQKHLS 129

Zfish   130 DSIWKPDLFFANEKGANFHEVTTDNK--LLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCI 192
            :.:|.|.:|||||:.::.  :.||.|  |..:|..|||:.|.|:...|.|.|:.:.||.|.|.|.
  Fly   130 ERLWLPHIFFANERESSI--LGTDEKDVLTSLSPEGNVIISTRMQASLYCWMNFQKFPFDQQFCS 192

Zfish   193 MQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQF----------ILKEEKD-LRYCTKHYNTGKF 246
            ..|||:.|..:|||.||:....:.....:.|.::          |::.:.| ||:..   ..|.:
  Fly   193 TVLESWMYNTSDLILEWEPHTPISFDPEMRLTEYNMAQFWHNTTIVQSDGDNLRHGA---FAGNY 254

Zfish   247 TCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRA 311
            :.:....:|:|::|:||:..|:||::||.:||||||:..||:|.|:.||.:|:|:..|.||....
  Fly   255 SSLSFTVNLKREIGFYLLDYYLPSMMIVAISWVSFWLQADASPPRIMLGTSTMLSFITLSSSQSK 319

Zfish   312 SLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIARQHKELLRFQR---------------RRR 361
            :||||||:|..::|...|..|:|.:|:|:|.||.|.|: ||.:..::               .||
  Fly   320 NLPKVSYIKVSEVWFLGCTFFIFGSLVEFAFVNTIWRR-KENIELKKVNSKYIIKSTLTPRPARR 383

Zfish   362 HLKEDEAGDGRFSFAAYGMGPAC------------LQAKDGMAIKGNNN------NAP------- 401
            .:....:.:.|        ..:|            ::..:|...:|.||      |.|
  Fly   384 QIGGSLSNESR--------ARSCSSLDNIVSSTESVRNGNGTVNQGFNNYLTVHPNLPIIRTECA 440

Zfish   402 ---------TSTN--------------PPEKTVEEMRKLFISRAKRIDTVSRVAFPLVFLIFNIF 443
                     ..||              ||..|....:::    |..||..||..||.:||.||..
  Fly   441 EADTVSICSARTNNDHIVDVDKDKKDTPPTFTTMTPQEI----AMWIDRRSRFLFPAMFLAFNAL 501

Zfish   444 YW 445
            ||
  Fly   502 YW 503

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
glra1	XP_005173152.1	LIC	7..448	CDD:273305	141/522 (27%)
		Neur_chan_LBD	38..259	CDD:280998	63/234 (27%)
		Neur_chan_memb	266..445	CDD:280999	68/241 (28%)
SecCl	NP_001261986.1	LIC	43..505	CDD:273305	136/490 (28%)
		Neur_chan_LBD	44..267	CDD:280998	63/238 (26%)
		Neur_chan_memb	275..503	CDD:280999	68/240 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	2.010