DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HDC and Gad1

DIOPT Version :10

Sequence 1:XP_016877583.1 Gene:HDC / 3067 HGNCID:4855 Length:697 Species:Homo sapiens
Sequence 2:NP_523914.2 Gene:Gad1 / 38484 FlyBaseID:FBgn0004516 Length:510 Species:Drosophila melanogaster


Alignment Length:468 Identity:104/468 - (22%)
Similarity:178/468 - (38%) Gaps:91/468 - (19%)


- Green bases have known domain annotations that are detailed below.


Human     6 EYRERGREMVDYICQYLSTVRER--RVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERIIMPG 68
            |.||...:::|.:..::....:|  :|.....|..::..|....|:.......:..|....:...
  Fly    32 ETREFLLKVIDVLLDFVKATNDRNEKVLDFHHPEDMKRLLDLDVPDRALPLQQLIEDCATTLKYQ 96

Human    69 VVHWQSPHMHAYYPALTSWPSLL---GDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLP 130
            |   ::.|.| ::..|::...|:   |:.|....|...||:..:|....:|..|:..:.:::|. 
  Fly    97 V---KTGHPH-FFNQLSNGLDLISMAGEWLTATANTNMFTYEIAPVFILMENVVLTKMREIIGW- 156

Human   131 EHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESCLNARLVAYASDQAHS 195
                     |.|..:|....|.|.|.|.||||.    :|..:..:.....|...||.:.|||.|.
  Fly   157 ---------SGGDSILAPGGSISNLYAFLAARH----KMFPNYKEHGSVGLPGTLVMFTSDQCHY 208

Human   196 SVEKAGLI-------SLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAF 253
            |::....:       .:|    :|.|::..:....|::.|.|.|.:|.:|.||.||.|||.:.||
  Fly   209 SIKSCAAVCGLGTDHCIV----VPSDEHGKMITSELERLILERKAKGDIPFFVNATAGTTVLGAF 269

Human   254 DCLSELGPISKAHHPCSPPLSLARCETSFPTSYLPSGQVMFASSGAREGLWLHIDAAYAGTAFLC 318
            |.::.:..|.:.::          |                         |:|||||:.|...:.
  Fly   270 DDINTIADICQKYN----------C-------------------------WMHIDAAWGGGLLMS 299

Human   319 -----PEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKL--QQTFSVNPIYLRHANSG 376
                 |.|    .|:|.|||.|:||.|.|.....|:....|:...|  ....|...:::......
  Fly   300 RKHRHPRF----TGVERADSVTWNPHKLMGALLQCSTIHFKEDGLLISCNQMSAEYLFMTDKQYD 360

Human   377 VATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHL 441
            ::.|.....|...|.....|||...|:.|.:..:.......|:.:|....:|     |...:.||
  Fly   361 ISYDTGDKVIQCGRHNDIFKLWLQWRAKGTEGFEQQQDRLMELVQYQLKRIR-----EQSDRFHL 420

Human   442 GLVVFRLKGPNCL 454
                  :..|.|:
  Fly   421 ------ILEPECV 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDCXP_016877583.1 Pyridoxal_deC 36..449 CDD:395219 96/429 (22%)
Gad1NP_523914.2 Pyridoxal_deC 64..434 CDD:395219 98/436 (22%)

Return to query results.
Submit another query.