DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC2 and HDAC3

DIOPT Version :10

Sequence 1:NP_001518.3 Gene:HDAC2 / 3066 HGNCID:4853 Length:488 Species:Homo sapiens
Sequence 2:NP_651978.2 Gene:HDAC3 / 44446 FlyBaseID:FBgn0025825 Length:438 Species:Drosophila melanogaster


Alignment Length:428 Identity:247/428 - (57%)
Similarity:332/428 - (77%) Gaps:12/428 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    10 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYI 74
            ::|.|:|:.|:||::||.||||||.|:.:||:|::||||::||:||||:||:|::|.::||||||
  Fly     4 RRVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHSDEYI 68

Human    75 KFLRSIRPDNMS----EYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVN 135
            .:|:.:.|.|:.    .|:|.:..|:||||||||||||:||.:.||.|:.||.|||...:|:.:|
  Fly    69 AYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLNHNHSDICIN 133

Human   136 WAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFH 200
            |:||||||||.||||||||||||:.||||||||.||||||||:||||||:||||.||||||.|||
  Fly   134 WSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQEAFYLTDRVMTASFH 198

Human   201 KYGEY-FPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGA 264
            |||.| ||||||:.:|||..|:||:||.|:::||||:||.|:||||||.:|:.|:|:|:||||||
  Fly   199 KYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPIISAIMDFYRPTAIVLQCGA 263

Human   265 DSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNEL 329
            |||:|||||||:|:.|||.:||:.||..|:|.|::||||||:||||||||:||::.:|.:|.|:|
  Fly   264 DSLAGDRLGCFSLSTKGHGECVKFVKELNVPTLVVGGGGYTLRNVARCWTHETSLLVDQDIENDL 328

Human   330 PYNDYFEYFGPDFKLHISP---SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVH 391
            |..:|:::|.|||.||  |   |...|.|:.:|:|.|.:.::|||:|..|:|.|||...|.|...
  Fly   329 PATEYYDFFAPDFTLH--PEINSRQDNANSKQYLELIVKHVYENLKMCQHSPSVQMVQTPPDVDL 391

Human   392 ED--SGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 427
            |:  |..|:..|||.|||:...||.:....||.|.:.:
  Fly   392 EELRSNREEASDPDVRISVADEDKLVDAKNEFYDGDQD 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC2NP_001518.3 HDAC2 9..374 CDD:212535 225/371 (61%)
Histone deacetylase 9..322 203/316 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..488 14/41 (34%)
HDAC3NP_651978.2 HDAC3 4..388 CDD:212529 232/385 (60%)

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