DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC2 and HDAC1

DIOPT Version :10

Sequence 1:NP_001518.3 Gene:HDAC2 / 3066 HGNCID:4853 Length:488 Species:Homo sapiens
Sequence 2:NP_647918.2 Gene:HDAC1 / 38565 FlyBaseID:FBgn0015805 Length:521 Species:Drosophila melanogaster


Alignment Length:487 Identity:373/487 - (76%)
Similarity:422/487 - (86%) Gaps:4/487 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     5 QGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYH 69
            |...||:||||||.||||||||||||||||||||||||||||||||||||||||||||:||||:|
  Fly     2 QSHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFH 66

Human    70 SDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAV 134
            ||||::|||||||||||||:||||||||||||||||||:||||||.|||||.|||||:|.:::.:
  Fly    67 SDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICI 131

Human   135 NWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 199
            ||.||||||||||||||||||||||.|||||||||||||||||:|||||||||||||||||||||
  Fly   132 NWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSF 196

Human   200 HKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGA 264
            |||||||||||||||||||||||||||.|:|||:||::|..||.||||||||.:||:||||||||
  Fly   197 HKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISKVMETFQPAAVVLQCGA 261

Human   265 DSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNEL 329
            |||:||||||||||||||.||||.||.:|||.||:||||||||||:|||||||:|||..||.|||
  Fly   262 DSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSRCWTYETSVALAVEIANEL 326

Human   330 PYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDS 394
            |||||||||||||||||||||||||||.||:||||.||||||||||||||||:|||||||::::|
  Fly   327 PYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPEDAINDES 391

Human   395 GDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEED---KKETED 456
            .|||..|.|.|:.....||||..:.|:||||||||||||:...:|...|:.|:::|   .|.:.:
  Fly   392 DDEDKVDKDDRLPQSDKDKRIVPENEYSDSEDEGEGGRRDNRSYKGQRKRPRLDKDTNSNKASSE 456

Human   457 KKTDVKEEDKSKDNS-GEKTDTKGTKSEQLSN 487
            ..:::|:|.:..|.: ||::....|.|...||
  Fly   457 TSSEIKDEKEKGDGADGEESTASNTNSNNNSN 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC2NP_001518.3 HDAC2 9..374 CDD:212535 318/364 (87%)
Histone deacetylase 9..322 272/312 (87%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..488 39/103 (38%)
HDAC1NP_647918.2 Arginase_HDAC 5..372 CDD:450134 319/366 (87%)

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