DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC2 and HDAC11

DIOPT Version :10

Sequence 1:NP_001518.3 Gene:HDAC2 / 3066 HGNCID:4853 Length:488 Species:Homo sapiens
Sequence 2:NP_733048.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster


Alignment Length:309 Identity:81/309 - (26%)
Similarity:127/309 - (41%) Gaps:71/309 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    29 HPMKPHRIRMTHNLL-----LNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR---------- 78
            ||....:.:..|.||     |:.|.:     |.|.:.|.:::.:.|:.||:|.||          
  Fly    51 HPFDAAKGKHIHKLLCAQLQLDDGSF-----YEPTELTKDQLRRIHTREYLKSLRWSMNVACIAE 110

Human    79 ----SIRPDN--MSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWA 137
                :..|:.  ...|.:.| ||.                 :.|..:||.:.|:   ...|:|..
  Fly   111 VPLMAFVPNRYIQRSYLRPM-RFQ-----------------AAGSILAGKLALD---YGWAINLG 154

Human   138 GGLHHAKKSEASGFCYVNDIVLAILELLKYH----QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198
            ||.||.......|||...||.|.|:.|.:..    :|::.:|:|.|.|:|.|..|.....|..  
  Fly   155 GGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFNNVAAVYI-- 217

Human   199 FHKYGEY-FPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQC 262
            |..|..: :|     ||..|.:....||.  :|:..:|..|.:..|..:.:.:..::|..||...
  Fly   218 FDMYNAFVYP-----RDHVAKESIRCAVE--LRNYTEDGFYLRQLKRCLMQSLAEFRPDMVVYNA 275

Human   263 GADSLSGDRLGCFNLTVKGHAKCVE----VVKTF---NLPLLMLGGGGY 304
            |.|.|.||.||...::.:|   .:|    |..||   .:|::||..|||
  Fly   276 GTDVLEGDPLGNLAISAEG---VIERDRLVFSTFRALGIPVVMLLSGGY 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC2NP_001518.3 HDAC2 9..374 CDD:212535 81/309 (26%)
Histone deacetylase 9..322 81/309 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..488
HDAC11NP_733048.1 HDAC_classIV 51..336 CDD:212519 81/309 (26%)
Blue background indicates that the domain is not in the aligned region.

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