DRSC/TRiP Functional Genomics Resources

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Protein Alignment HTT and FAS1

DIOPT Version :10

Sequence 1:NP_002102.4 Gene:HTT / 3064 HGNCID:4851 Length:3144 Species:Homo sapiens
Sequence 2:NP_012739.1 Gene:FAS1 / 853653 SGDID:S000001665 Length:2051 Species:Saccharomyces cerevisiae


Alignment Length:2155 Identity:378/2155 - (17%)
Similarity:648/2155 - (30%) Gaps:801/2155 - (37%)


- Green bases have known domain annotations that are detailed below.


Human    74 PPPPPGPAVAEEP----------------LHRPKKELSATKKDRV-NHCLTICENIVAQSVRNSP 121
            |.|..|.|..:||                |..|.|   ..:.|:| |.|||..||...       
Yeast    42 PEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSK---VGQFDQVLNLCLTEFENCYL------- 96

Human   122 EFQKLLGIAMELFLLCSDDAESDVRMV-ADECLNKVIKALMDSNLP---RLQLELYKEIKKNGAP 182
            |...:..:|.:|.      .|:|..:| ..|.:...|.|.:.:..|   :....|::.:.:..|.
Yeast    97 EGNDIHALAAKLL------QENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQ 155

Human   183 ---------------RSLR----------AALWRFA--ELAHLVR----PQKCRPYLVNLLPCLT 216
                           ..||          ..|.:|:  .|:.|:|    .:|.....:|:|..|.
Yeast   156 LVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLE 220

Human   217 RTSKRPEESVQETLAAAVPKIMASFGNFANDNEIKVLLKAFIANLKSSSPTIRRT----AAG--- 274
            ..|..|::....::..:.|.|          ..|::......|.|...:|...|:    |.|   
Yeast   221 NPSNTPDKDYLLSIPISCPLI----------GVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQ 275

Human   275 ---SAVSICQHSRRTQYFYSWLLNVLLGLLVPVEDEHSTLLILGVLLTLRYLVPLLQQQVKDTSL 336
               :||:|.:......:|            |.|....:.|..:||.....|....|...:.:.||
Yeast   276 GLVTAVAIAETDSWESFF------------VSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSL 328

Human   337 KGSFGVTRKEMEVSPSAEQLVQVY-ELTLHHT---QHQDHNVVTGALELLQQLFRTPPPELLQTL 397
            :.:.||....:.:|...::.||.| ..|..|.   :..:.::|.||    :.|..:.||:.|..|
Yeast   329 ENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGA----KNLVVSGPPQSLYGL 389

Human   398 TAVGGIGQLTAAKEESG-GRSR------------------------------------------- 418
            ...     |..||..|| .:||                                           
Yeast   390 NLT-----LRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVS 449

Human   419 ----------------------SGSIVELIAG-------------------------GGSSCSPV 436
                                  ||||.|.|..                         ||:|...|
Yeast   450 FNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLGV 514

Human   437 LSRKQKG-----KVLLGEEEALEDD----SESRSDVSSSALTAS-----------VKDEISGELA 481
            |:.:.|.     .::.|..:...||    .:...||:|:.|..:           :|:: ||::.
Yeast   515 LTHRNKDGTGVRVIVAGTLDINPDDDYGFKQEIFDVTSNGLKKNPNWLEEYHPKLIKNK-SGKIF 578

Human   482 ASSGVS-------------TPGSAGHDIITEQPRSQHTLQADSVDLASCDLTSSATDGDEEDILS 533
            ..:..|             ||.:...|.:.....:.:|::.......|....::|.|.....|..
Yeast   579 VETKFSKLIGRPPLLVPGMTPCTVSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVSQIEK 643

Human   534 HSSSQVSAVPSDPAMDLNDGTQASSPISDSS---QTTTEGPDSAVTPS-DSSEIVLDGTDNQYLG 594
            .|:..::.:..:|.| |..|......:....   |..|.|   |..|| :.:...::....:|||
Yeast   644 GSTFGINLIYVNPFM-LQWGIPLIKELRSKGYPIQFLTIG---AGVPSLEVASEYIETLGLKYLG 704

Human   595 LQIGQPQDEDEEATGILPDEASEAFRNSSMALQ-------------QAH--LLKNMSHCRQPSDS 644
            |:.|. .|...:...|     ::|..|..:|||             .||  :|:..|..|:..:.
Yeast   705 LKPGS-IDAISQVINI-----AKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHPNI 763

Human   645 SVDKFVLRDEATEPGDQENKPCRIKGDIGQSTDDDSAPLVHCVRLLSASFLLTG----------- 698
            .:                     |.|. |..:.||:.|            .|||           
Yeast   764 ML---------------------IFGS-GFGSADDTYP------------YLTGEWSTKFDYPPM 794

Human   699 -------GKNVLVPDRDVRVSVKALALSCVGAAVALHPESFFSKLYKVP---------------- 740
                   |..|::. ::|:.|..  |..|:.|...: |:..:.:.||.|                
Yeast   795 PFDGFLFGSRVMIA-KEVKTSPD--AKKCIAACTGV-PDDKWEQTYKKPTGGIVTVRSEMGEPIH 855

Human   741 ------------LDTTEY------------PEEQYVSDILNYIDHGDP-------QVRGATAI-- 772
                        .|.|.:            .:..|:...|| .|...|       |.|....:  
Yeast   856 KIATRGVMLWKEFDETIFNLPKNKLVPTLEAKRDYIISRLN-ADFQKPWFATVNGQARDLATMTY 919

Human   773 --LCGTLICSILSRSRFHVGDWMG-TIRTLTGN-------------TFSLADCIPLLRKTLKDES 821
              :...|:..:..||   ...|.. |.||.||:             |.||.....||.|  .||:
Yeast   920 EEVAKRLVELMFIRS---TNSWFDVTWRTFTGDFLRRVEERFTKSKTLSLIQSYSLLDK--PDEA 979

Human   822 SVTCKLACTAVR---------NCVMSLCSSSYSE-LGLQLIID---VLTLRNSSYWLVRTELLET 873
            ......|..|.|         :..:|:|.:...: :....::|   .:..:..|.|  ::|.||.
Yeast   980 IEKVFNAYPAAREQFLNAQDIDHFLSMCQNPMQKPVPFVPVLDRRFEIFFKKDSLW--QSEHLEA 1042

Human   874 LAEIDFRLVSFLEAKA----------------ENLHRG-----AHHYTG---------------- 901
            :.:.|.:....|....                :.:|.|     .|.|.|                
Yeast  1043 VVDQDVQRTCILHGPVAAQFTKVIDEPIKSIMDGIHDGHIKKLLHQYYGDDESKIPAVEYFGGES 1107

Human   902 LLKLQERVLNNVVIHLLGDEDPRV-----------------------RHVAAASLIRLVPKLFYK 943
            .:.:|.:|.::.|     .||..|                       ||.:.........|:|. 
Yeast  1108 PVDVQSQVDSSSV-----SEDSAVFKATSSTDEESWFKALAGSEINWRHASFLCSFITQDKMFV- 1166

Human   944 CDQGQADPVVAVARDQSSVYLKLLMHETQPPSHFSVSTITRIYRGYNLLPSITDVTMENNLSRVI 1008
                 ::|:..|.:....:.:::....|   |..:|.|::...:| .|.|::....::.|:    
Yeast  1167 -----SNPIRKVFKPSQGMVVEISNGNT---SSKTVVTLSEPVQG-ELKPTVILKLLKENI---- 1218

Human  1009 AAVSHELITSTTRALTFGCCEALCLLSTAFPVCIWSLGWHCGVPPLSASDESRKSCTVGMATMIL 1073
              :..|:|.:.|..   |...:|.||....|        ..|..|:|...|.|..       .|.
Yeast  1219 --IQMEMIENRTMD---GKPVSLPLLYNFNP--------DNGFAPISEVMEDRNQ-------RIK 1263

Human  1074 TLLSSAW----FPLDLSAHQDALILAGNLLAASAPKSLRSSWASEEEANPAATKQEEVWPALGDR 1134
            .:....|    |.||.....   ::.|.....:|.:....:.|.........::.:....|..|.
Yeast  1264 EMYWKLWIDEPFNLDFDPRD---VIKGKDFEITAKEVYDFTHAVGNNCEDFVSRPDRTMLAPMDF 1325

Human  1135 ALV----PMVEQLFSH-----LLKVINICAHVLDDVAPGPAIK-----------AALPSLTNPPS 1179
            |:|    .:::.:|.:     |||::    |:.:.....|..|           |.:.|:.|.|:
Yeast  1326 AIVVGWRAIIKAIFPNTVDGDLLKLV----HLSNGYKMIPGAKPLQVGDVVSTTAVIESVVNQPT 1386

Human  1180 ------LSPIRRKGKEKEPGEQASVPLSPKKGSEASAASRQSDTSGPVTTSKSSSLGSFYHLPSY 1238
                  :..:.|.||                               ||....|    ||::..:|
Yeast  1387 GKIVDVVGTLSRNGK-------------------------------PVMEVTS----SFFYRGNY 1416

Human  1239 LKLHDVLKATHANYKVTLDLQNSTEKFGGFLRSA---------LDVLSQILELATLQDIGKCVEE 1294
            ....:..:.|   .:....:...|.|....|||.         .|:|::.|...|..::......
Yeast  1417 TDFENTFQKT---VEPVYQMHIKTSKDIAVLRSKEWFQLDDEDFDLLNKTLTFETETEVTFKNAN 1478

Human  1295 ILGYLKSCFS----REPMMATV---------------CVQQLLKTLFGT-----NLASQ-----F 1330
            |...:| ||.    ..|...||               .|...||....|     ||.:.     .
Yeast  1479 IFSSVK-CFGPIKVELPTKETVEIGIVDYEAGASHGNPVVDFLKRNGSTLEQKVNLENPIPIAVL 1542

Human  1331 DGLSSNPSKSQGRAQRLG---------------------------SSSVRPGLYHYC-------- 1360
            |  |..||.::..|:..|                           |:|||..:.::.        
Yeast  1543 D--SYTPSTNEPYARVSGDLNPIHVSRHFASYANLPGTITHGMFSSASVRALIENWAADSVSSRV 1605

Human  1361 ---------FMAPYTHFTQALADASL---RNMVQAEQEND-----TSGWFDVLQKVSTQLKT--- 1405
                     .:.|.|....::....:   |.:::.|..|:     .:|..::.|.|:|.:.|   
Yeast  1606 RGYTCQFVDMVLPNTALKTSIQHVGMINGRKLIKFETRNEDDVVVLTGEAEIEQPVTTFVFTGQG 1670

Human  1406 --------NLTSVTK------NRADKN------------AIHNHIRL------------------ 1426
                    :|...:|      ||||.:            .|:|.:.|                  
Yeast  1671 SQEQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSA 1735

Human  1427 --FEPLV---------IKALKQYTTTTCVQLQKQVLDLLAQLVQLRVNYC------------LLD 1468
              ||.:|         .|.:.:::|:...:.:|.:|. ..|..|..:...            |:.
Yeast  1736 MIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLS-ATQFTQPALTLMEKAAFEDLKSKGLIP 1799

Human  1469 SDQVFIGFVLKQFEYI-EVGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCD----- 1527
            :|..|.|..|.::..: .:......|:::..:|:        |..:.| :.:|:     |     
Yeast  1800 ADATFAGHSLGEYAALASLADVMSIESLVEVVFY--------RGMTMQ-VAVPR-----DELGRS 1850

Human  1528 --GIMA--SGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLE 1588
              |::|  .||.|.:.:..|||.:|..:....|.........:|.|:.|....|..|.....||.
Yeast  1851 NYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRALDTVTNVLN 1915

Human  1589 MFILVLQQCHKENEDKWKRLSRQIADIILPMLAKQQMHIDSHEALGVLNTLFEIL----APSSLR 1649
            ...|                  |..|||....:.....::.|        ||||:    ..|:::
Yeast  1916 FIKL------------------QKIDIIELQKSLSLEEVEGH--------LFEIIDEASKKSAVK 1954

Human  1650 PVDMLLRSMF 1659
            |..:.|...|
Yeast  1955 PRPLKLERGF 1964

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HTTNP_002102.4 Sufficient for interaction with TPR. /evidence=ECO:0000269|PubMed:15654337 3..13
CAG repeat region 18..40
HEAT repeat 133..155 CDD:293787 5/22 (23%)
HEAT repeat 169..197 CDD:293787 7/54 (13%)
HEAT 1 206..243 7/36 (19%)
HEAT repeat 210..240 CDD:293787 7/29 (24%)
HEAT 2 248..285 10/46 (22%)
HEAT repeat 249..278 CDD:293787 8/38 (21%)
HEAT 3 318..362 10/44 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 449..471 6/25 (24%)
Interaction with ZDHHC17. /evidence=ECO:0000269|PubMed:28757145 493..504 1/10 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 519..585 14/69 (20%)
HEAT 4 804..841 11/45 (24%)
HEAT 807..936 CDD:441023 31/201 (15%)
HEAT 5 904..942 9/60 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1178..1227 6/54 (11%)
DUF3652 1515..1555 CDD:463554 12/48 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2332..2353
Nuclear export signal. /evidence=ECO:0000250 2397..2406
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2635..2664
FAS1NP_012739.1 FAS_N 5..131 CDD:407694 26/104 (25%)
SAT 158..413 CDD:465005 58/285 (20%)
Acyl_transf_1 <335..493 CDD:471802 27/166 (16%)
NMO 590..>821 CDD:367316 50/277 (18%)
DUF1729 727..1074 CDD:369827 67/392 (17%)
FAS_meander 1134..1271 CDD:407799 28/170 (16%)
hot_dog 1284..1406 CDD:469797 23/156 (15%)
FAS_MaoC 1536..1660 CDD:239531 16/125 (13%)
Acyl_transf_1 1663..2037 CDD:395567 62/343 (18%)
Blue background indicates that the domain is not in the aligned region.

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