Sequence 1: | NP_571436.2 | Gene: | l1cama / 30634 | ZFINID: | ZDB-GENE-990415-10 | Length: | 1271 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001245581.1 | Gene: | Nrg / 31792 | FlyBaseID: | FBgn0264975 | Length: | 1309 | Species: | Drosophila melanogaster |
Alignment Length: | 1338 | Identity: | 379/1338 - (28%) |
---|---|---|---|
Similarity: | 599/1338 - (44%) | Gaps: | 134/1338 - (10%) |
- Green bases have known domain annotations that are detailed below.
Zfish 18 ALLLPLLLLAVALKPGNTTINIPSRYKIRDLKSPPVITAQP---------KSVTTFSADDITLTC 73
Zfish 74 DATGNPPPTFRWVKDGVEFD-PSKDPDLSVSRDSGTFSLTAKDGPIHQYQGRYNCYASNELGTAV 137
Zfish 138 SNEARIVTENTPTLQKEKIITKKVEEGESVVLPCNPPNGTVAPVIHWM-----DKKLRHIQQNER 197
Zfish 198 VIQGRDGNLYFSHATVADSRDD--YTCNIQFPSARVIKLKEPIKLTVSSSN-SVVRNRRPQMMRP 259
Zfish 260 TGSSSSYLVLSGQNLELECIVQGLPSPSIQWIRKDG--VLSESRTTKDSNDRVLRFQNISETDGG 322
Zfish 323 EYQCTATNPQG-MSTHTYRVTVEAAPYWIKEPKSQLYAPGETVKLECKADGIPKPEVTWSINGIL 386
Zfish 387 LSDIDPDPRRSVKHGVLTLKNVELSDTAVFQCKAASKHGSVLINAYVYVIELPPQILTEDGLMYS 451
Zfish 452 VAEGQTTELACETFGSPRPNVTW-EGESWGALVANQRMIQLSDGSLQISNASLNDSGQYTCTVNN 515
Zfish 516 --SKITITAELDVLNKTVIVKPPLALRIQRGKPATLTCEYQVDSRQDLPQVQWRKNTQKLTESSD 578
Zfish 579 SDKYMIDESTLIIPEVEEEDEGTYTCEVITTLDMAKASGSITIVDRPDPPSLIQMTEPKERRVTL 643
Zfish 644 SWTPGADHNSPVLEYLIEFEETGSDRKEWE-ELSRVSGSSQRATLPLKPFISYRFRVIAINEIGK 707
Zfish 708 SDPSMVTEAYSTPAAPPDSNPEGVRSDSDEPGTLVITWKEMDRRSFNGPDFHYKVMWRKVLGSGP 772
Zfish 773 SWHTKDI---TSPPFVVTDVGNFSAFDIKVQAVNEMGE-GPEPKSIIGYSGEDYPLEAPLDVGLI 833
Zfish 834 LI-NSTAIKVTWAAVNRETVRGRLQGYKIYLTYLGPKGQHLRREPKTTFVVTTDSNEEKKVLGDL 897
Zfish 898 QPFSHYNLAVSVFNYKGEGPQSESILFFTPEGVPGPPSSLMLDSPSETEMTVHWTPPNQPNGNLI 962
Zfish 963 GYILQHQQL---------DNDASLMQVVKISDPTASHYKLK-LDPHSRYRFYLRGYTAIGEG--- 1014
Zfish 1015 ---LPIIKDGATTLDPVPPS----DISISTGETSVNLTWV-SKERQRNVEFF-IHYLRKDGPDKW 1070
Zfish 1071 -EKSEKVNSTQSFYTLHGLQPGSQYRLKI-----DFNNTKWEQEI--QTAGARVMEVKSGFVTES 1127
Zfish 1128 WFIGLISALVLLLLVLLILCFIKRSKGGKYSVKEK----------EEGQIDSEARPMNNEAFGEY 1182
Zfish 1183 RSLESDNEEKRTASQPSLCE----DSKLCTD------------DGLDDYANSNSVQTEVIMDESL 1231
Zfish 1232 ASQSSGVRDVPDAETQESSPLNPATAISHHGLPNSAAL 1269 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
l1cama | NP_571436.2 | Ig_L1-CAM_like | 69..144 | CDD:319299 | 27/75 (36%) |
Ig | 147..241 | CDD:386229 | 27/100 (27%) | ||
Ig | 274..344 | CDD:386229 | 20/72 (28%) | ||
Ig | 361..436 | CDD:386229 | 24/74 (32%) | ||
IG_like | 450..526 | CDD:214653 | 23/78 (29%) | ||
Ig | 547..616 | CDD:319273 | 19/68 (28%) | ||
FN3 | 625..717 | CDD:238020 | 28/92 (30%) | ||
FN3 | 726..817 | CDD:238020 | 29/94 (31%) | ||
FN3 | 825..926 | CDD:238020 | 27/101 (27%) | ||
FN3 | 931..1024 | CDD:238020 | 29/108 (27%) | ||
FN3 | 1027..>1098 | CDD:238020 | 19/77 (25%) | ||
Bravo_FIGEY | 1150..1234 | CDD:372781 | 21/109 (19%) | ||
Nrg | NP_001245581.1 | Ig | 55..128 | CDD:299845 | 27/75 (36%) |
IG_like | 57..127 | CDD:214653 | 27/72 (38%) | ||
Ig | 135..214 | CDD:299845 | 26/79 (33%) | ||
IG_like | 141..216 | CDD:214653 | 25/75 (33%) | ||
ig | 251..332 | CDD:278476 | 24/81 (30%) | ||
I-set | 339..427 | CDD:254352 | 30/87 (34%) | ||
Ig | 354..427 | CDD:299845 | 24/72 (33%) | ||
I-set | 432..517 | CDD:254352 | 26/88 (30%) | ||
Ig | 446..517 | CDD:299845 | 22/73 (30%) | ||
I-set | 522..611 | CDD:254352 | 23/89 (26%) | ||
ig | 525..609 | CDD:278476 | 22/84 (26%) | ||
FN3 | 613..707 | CDD:238020 | 29/95 (31%) | ||
FN3 | 716..807 | CDD:238020 | 29/91 (32%) | ||
fn3 | 817..905 | CDD:278470 | 24/94 (26%) | ||
FN3 | 917..1004 | CDD:238020 | 24/92 (26%) | ||
FN3 | 1041..1111 | CDD:238020 | 17/73 (23%) | ||
Bravo_FIGEY | 1155..>1221 | CDD:290593 | 17/66 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D208655at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.880 |