DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fli1 and Ets96B

DIOPT Version :9

Sequence 1:XP_021323256.1 Gene:fli1 / 30619 ZFINID:ZDB-GENE-980526-426 Length:474 Species:Danio rerio
Sequence 2:NP_996290.1 Gene:Ets96B / 42952 FlyBaseID:FBgn0039225 Length:640 Species:Drosophila melanogaster


Alignment Length:440 Identity:116/440 - (26%)
Similarity:168/440 - (38%) Gaps:108/440 - (24%)


- Green bases have known domain annotations that are detailed below.


Zfish     9 DTSSYVKVRHHRHHEQEALSVVSEDQSLFEPPYAAAAPLPKTDMTASGTQDYGQTHKINPIPPQQ 73
            ::|.|....||.||....|    .|:.:.   ||...|.|........|...|            
  Fly   181 ESSWYAHHHHHHHHHHHQL----PDELVM---YATPTPTPAIGKFGLDTSTEG------------ 226

Zfish    74 EWINQPVRVNVKR-EYDHINGSRESPVDCSVGK-------------CNKMVGGTEASQMNYTGYM 124
             ::|....||||. .:|..:...:.|.......             |.:.               
  Fly   227 -YLNARYNVNVKGVRHDRTSSFFDIPAVTHPHNHPHPHPHPHPHPYCYRF--------------- 275

Zfish   125 DEKCAPPPNMTTNERRVIVPAGEYC--INPSLWSPDHVR----------------------QWLD 165
              ..:||..:..........|..||  ::.....|.|.:                      |...
  Fly   276 --PSSPPAGILKKSDEEATSAAVYCSDVSSGQHFPHHTKIEHADSTTTAAQQQQQQQEQQQQQQQ 338

Zfish   166 WAIKEYGLQEIDTAM------FHSTDGKELCKMSKDDFL-RLTSVYNTEVL-LSHLNYLRESSSS 222
            ...::...|::..|.      .||..|....:.::...| .||.::..... .||...:   |||
  Fly   339 QQQQQQHQQQLQQAAALHPHHHHSHHGHHGHQQAEQQALTHLTPLHAASAFKFSHTAVI---SSS 400

Zfish   223 ISYNTPSH-------------ADQSP-RLAAKDDA--SYDAVRRTGWSNNMHSGKGSPTVVSQSV 271
            ..|.||||             .|.|| .|||..||  .||:.......::.:.....|.||..:.
  Fly   401 AVYATPSHYAHQQQTQSQSVYRDLSPTTLAAVSDADLKYDSGPYNAAISSTYPSALRPNVVDSTT 465

Zfish   272 SKNPDQPRPQPDPYQILGPTSS---RLANPGSGQIQLWQFLLELLSD-SANAGCITWEGTNGEFK 332
            |.:.:....|  .|...|.::|   :..:...|.:||||||:.||.: :.:|.||.|.|...|||
  Fly   466 SSDAELRLDQ--FYASNGISTSSNGQAISQRRGSLQLWQFLVALLDEPTTSASCIAWTGRGMEFK 528

Zfish   333 MTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKF 382
            :.:|:|||||||.:|::|.||||||||:|||||:|.||.||:|:||.|:|
  Fly   529 LIEPEEVARRWGLQKNRPAMNYDKLSRSLRYYYEKGIMQKVNGERYVYRF 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fli1XP_021323256.1 SAM_PNT-FLI-1 131..226 CDD:188883 20/126 (16%)
ETS 302..385 CDD:197710 49/82 (60%)
Ets96BNP_996290.1 ETS 497..583 CDD:197710 49/82 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3806
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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