Protein Alignment ldb2a and Chi

DIOPT Version :9

• Sequence 1: XP_005157399.3
• Gene: ldb2a / 30577
• ZFINID: ZDB-GENE-990415-136
• Length: 387
• Species: Danio rerio
• Sequence 2: NP_726403.2
• Gene: Chi / 37837
• FlyBaseID: FBgn0013764
• Length: 596
• Species: Drosophila melanogaster
• Alignment Length: 407
• Identity: 233/407 - (57%)
• Similarity: 286/407 - (70%)
• Gaps: 48/407 - (11%)

Zfish     4 PPHDPFYSSPFGPF-------------YRRHSPYMVQPEYRIYEMNKRLQSRTEESDSLWWDAFA 55
            ||..||......|.             :|||:.|....|:|::|:|||||.|.||||:.|||:|.
  Fly   198 PPASPFGHGGNHPMMGGPQQMERIDQGFRRHNSYFSHTEHRVFELNKRLQQRNEESDNCWWDSFT 262

Zfish    56 TEFFEEDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESFHNSCITVDC 120
            |||||:||.||:.|||||||||||||||||||:|.:::||||:|||:.|||:||||||:.||:||
  Fly   263 TEFFEDDARLTILFCLEDGPKRYTIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFHNTSITLDC 327

Zfish   121 DQCTMVTQHGKPMFTKVCTEGRLILEFAFDDLMRIKTWHFNIRQYRELIPRSILAMH-AQDPGVL 184
            ||||::||||||.|||||.:.||||||.:||.||||:||..|:.:|||||||::... ..||.:|
  Fly   328 DQCTVITQHGKPFFTKVCADARLILEFMYDDYMRIKSWHMTIKGHRELIPRSVIGTSLPPDPMLL 392

Zfish   185 EQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPAGH 249
            :|::|||||.|:||.||||||||||||||||||||||.|.|||||||||.||||||||||||.
  Fly   393 DQITKNITRAGITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQKWQRMVAPPG-- 455

Zfish   250 PQNFKTEIFPTNHKKEPTRQTTTKRRKRKNSASSASNSSLGNSAGGKKRSPAN-NFSLASQVPDV 313
                         ||:|.| ...||||||.|.|...|:|.......:||||:. :|||:||  ||
  Fly   456 -------------KKDPQR-PPNKRRKRKGSNSGGGNNSNTPPVTNQKRSPSGPSFSLSSQ--DV 504

Zfish   314 MVVGEPTLMGGEFGDEDERLITRLENTQYDATNGLDDDD----DFTSSPALANNSPWN------- 367
            ||||||||||||||:|||||||||||||||.||.::.|:    ....|| ::.::||:
  Fly   505 MVVGEPTLMGGEFGEEDERLITRLENTQYDGTNAVEHDNHTGFGHADSP-ISGSNPWSIDRAGAI 568

Zfish   368 -SKPPTGQDSKPESTAS 383
             :.|  |..:.|::.|:
  Fly   569 PASP--GNGAAPQNNAN 583

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ldb2a	XP_005157399.3	LIM_bind	31..232	CDD:307769	143/201 (71%)
Chi	NP_726403.2	LIM_bind	238..440	CDD:280051	143/201 (71%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170579858
Domainoid	1	1.000	238	1.000	Domainoid score	I2238
eggNOG	1	0.900	-	-		E1_KOG2181
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H989
Inparanoid	1	1.050	461	1.000	Inparanoid score	I1534
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0002757
OrthoInspector	1	1.000	-	-		otm25566
orthoMCL	1	0.900	-	-		OOG6_105360
Panther	1	1.100	-	-	LDO	PTHR10378
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3240
SonicParanoid	1	1.000	-	-		X1842
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	14	13.780