Protein Alignment pax6a and sv

DIOPT Version :9

• Sequence 1: XP_009296153.1
• Gene: pax6a / 30567
• ZFINID: ZDB-GENE-990415-200
• Length: 459
• Species: Danio rerio
• Sequence 2: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Alignment Length: 593
• Identity: 175/593 - (29%)
• Similarity: 245/593 - (41%)
• Gaps: 202/593 - (34%)

Zfish    20 MQNKVYD-------ICNEGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHA 77
            :||...|       |..:||.|||||||||||||||||..||:||||||:|.|||||||.|:
  Fly   157 IQNGAEDSHSSQGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--- 218

Zfish    78 DAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWE 142
                       ||:|||||||.|||||||.:...||||||:||||.||..||.||||.|::||||
  Fly   219 -----------VSHGCVSKILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWE 272

Zfish   143 IRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK-------------QQMGADGMYEKLRMLNGQT 194
            ||||||:|.:|:.||:||||||||::||.|:||             |.:|  |.:.....::..|
  Fly   273 IRDRLLAEAICSQDNVPSVSSINRIVRNKAAEKAKHVHHHQQHHVSQSLG--GGHIATESVDSST 335

Zfish   195 GTWGTRPGWYPGTSVPGQPNQDGCQQSDGGGENTN---------SISSNGEDS------------ 238
            ||.|.          |..|..:    |.....|||         ||.::|.||
  Fly   336 GTIGE----------PQPPTSN----SSANSVNTNVSASASVHASIPTSGTDSVQVSVGHINANS 386

Zfish   239 -DETQMRLQLKRKL---------------------------QRNRT--SFTQEQIEALEKEFERT 273
             :.|.:....:::.                           ..|.|  |..:::|||.::..:..
  Fly   387 NETTHINSTAEQRTTGYSINGILGIQHGHHSHNNNNNSSVNNNNNTESSCKRKRIEAHDENHDTN 451

Zfish   274 HYP--DVFARERLAAKIDLPEARIQVWFSNRRAKW--RREEKLRNQ--------------RRQAS 320
            .:.  |...|:|::. ....:....:|    ..||  :.:.||..:              ..:||
  Fly   452 IHSDNDDGKRQRMST-YSGDQLYTNIW----SGKWCIKDDHKLLAELGNLTASTGNCPATYYEAS 511

Zfish   321 NSSSHIPISSSFST---------------------SVYQP------------------------- 339
            |..|..|||.|.:|                     |:|.|
  Fly   512 NGFSTTPISGSGATASGNDTSMLYDSITTISQTQSSIYTPAIGPSIGTGSLTPLVPISMHEMKLS 576

Zfish   340 ---IPQPTTPVSFTSGSMLGR--SDTALTNTYS----------------ALPP-----MPSFTMA 378
               |.:.|.|..:|:.:..|.  |.|:|.|..|                .|.|     :|..|..
  Fly   577 ANSIQEQTVPPFYTALAFDGNYTSMTSLENCSSLVGQEHIVMPESSDSNTLCPISTRIVPDITET 641

Zfish   379 NNLPMQPSQTSSYSCMLPTS----PSVNGRSYDTYTPPHMQAHMNSQSMAASGTTSTGLIS-PGV 438
            |:..::...|:|..|....:    .|.:.:|.|....||:. |:..:.:..:..::....: |..
  Fly   642 NSTRVKEPLTNSDGCSEDNNKEPEKSNSSQSSDHIASPHLH-HIGEEQLRGNRRSNLNASTHPSS 705

Zfish   439 SVPVQVPG 446
            .:|:|..|
  Fly   706 LIPLQPSG 713

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pax6a	XP_009296153.1	PAX	31..169	CDD:128645	93/137 (68%)
		Homeobox	255..307	CDD:306543	11/57 (19%)
		Retinal	341..>459	CDD:330657	27/134 (20%)
sv	NP_524633.3	PAX	175..299	CDD:128645	93/137 (68%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45636
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	3.010