DRSC/TRiP Functional Genomics Resources

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Protein Alignment tcf7l1b and pan

DIOPT Version :9

Sequence 1:NP_571371.2 Gene:tcf7l1b / 30556 ZFINID:ZDB-GENE-991110-10 Length:550 Species:Danio rerio
Sequence 2:NP_726528.2 Gene:pan / 43769 FlyBaseID:FBgn0085432 Length:1192 Species:Drosophila melanogaster


Alignment Length:812 Identity:222/812 - (27%)
Similarity:303/812 - (37%) Gaps:298/812 - (36%)


- Green bases have known domain annotations that are detailed below.


Zfish    11 ELGANDEMISFKDEGEQEDKISENVSAERDLDDVKSSLVNESE------------------NNSS 57
            :|.:|.|.:...|.....|.|.|.   :..|.|:|..|.|.|:                  ||.|
  Fly   243 KLKSNKEALDGYDLQHTCDFIREQ---KNILIDIKKKLDNLSDSSGKFRKRLSVRQSHIEVNNGS 304

Zfish    58 SSDSEQTERRPQPRADLESYEKARE--------------YFTEALRR-----QQDGCFFKSPHYP 103
            :|..|::.|| |...:.:|.|...|              |:..:|:|     ::||      .|.
  Fly   305 NSALEESVRR-QLNGNRKSIENLLEEVKRLYNQWSSAELYYVRSLQRLGLPSEEDG------EYT 362

Zfish   104 GYPFLMIPDLANPYLSNGALSPSARTYLQMKWP------------------------LLDVPGSA 144
            ..|...|..||...|||.::.|.....:..|.|                        :|.:..|.
  Fly   363 STPTHTIMALAAIALSNESILPQKTNAVHSKIPDVESESDFFLTSAKPKTLVEIEDIILQLASSV 427

Zfish   145 ALKDSQSPSPGH------------LSNKVPV-VQHA------HMHPLTP---------------- 174
            .:..|.|.|..|            .||..|. :.|:      |...:.|                
  Fly   428 NMHQSSSASTPHESYSDSVKSDCEESNSAPTCIWHSTRQTFRHKKDVEPCSTAAEIILEYASLSS 492

Zfish   175 --------LITYSNEFPPGTPPAHLSPE----------------ILDPK-----TGIPRTPHPAE 210
                    |:|.::.....|...:::.:                :.||.     :..|.||....
  Fly   493 SSNIETSRLLTSASNLTDVTENYNVTTQLPIVFNYNRESSAESIVTDPLLVPEFSTAPSTPSTGS 557

Zfish   211 LSPYYPLSPGAVGQIPHPLGWLVPQQGQ----HMYPITAGGFR----------------HPYPAL 255
            .|   ..|.|.|..|   .|....::.|    |:..:|...|:                ...|::
  Fly   558 NS---GCSTGMVSGI---FGLSQNRRKQRLARHIETLTTNSFKSNAIRGNVDNEITNQLKTSPSI 616

Zfish   256 -----------------AMNASMSS---LVSSRFSPHLVPHHPH-GLHQTGIPHPAIVSPV---- 295
                             :.|||:::   .:::.|...|.....: |..:|.| .|.|.:|.    
  Fly   617 RALPTENVSHLITKTLSSANASLTAQELSITNLFKERLCALQGNAGSMKTEI-FPMIDAPYDLSI 680

Zfish   296 --IKQEPNGELSPPVNTKSPGPNKKDED-KKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAIN 357
              ..:..|.|.....|.:|....:...| ||||||||||||||||||||||||||||||||||||
  Fly   681 GSKTKHMNLEAKHTSNAQSNESKETTNDKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAIN 745

Zfish   358 QILGRRWHSLSREEQAKYYELARKERQLHSQLYPGWSARDNYG---KRKKRKRD-NKTDSTPEDF 418
            ||||||||.||||||:||||.||:|||||.:||||||||||||   |:||||:| :.|||...:.
  Fly   746 QILGRRWHELSREEQSKYYEKARQERQLHMELYPGWSARDNYGYVSKKKKRKKDRSTTDSGGNNM 810

Zfish   419 S-----------------MRSKKPCVQYL-------PQE-------------------------- 433
            .                 .|.||.|::|:       |.|                          
  Fly   811 KKCRARFGLDQQSQWCKPCRRKKKCIRYMEALNGNGPAEDGSCFDEHGSQLSDDDEDDYDDDKLG 875

Zfish   434 ---------------------KMIDSPGSSHG-SMLDSPATPSAALASPA---APAATH-----S 468
                                 :.:.|||...| |.|.||:| :.:||||.   |.:||:     |
  Fly   876 GSCGSADETNKIEDEDSESLNQSMPSPGCLSGLSSLQSPST-TMSLASPLNMNANSATNVIFPAS 939

Zfish   469 EQA-------QPLSLTTKPERFPLLSKPPPSSSSSSSSSSSGLPTPPLLSRPLPFALLTPP---S 523
            ..|       ||    |..:|..|:|    :|.|||.|:||...||...|...|...:|.|   |
  Fly   940 SNALLIVGADQP----TAQQRPTLVS----TSGSSSGSTSSISTTPNTSSTVSPVTCMTGPCLGS 996

Zfish   524 PFHQAAL----HSHHALFQSQP-LSLVTKSSD 550
            ...:|.:    .||..:..|.| :|..|..|:
  Fly   997 SQERAMMLGNRFSHLGMGLSPPVVSTSTSKSE 1028

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tcf7l1bNP_571371.2 CTNNB1_binding 1..231 CDD:285538 65/344 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..76 21/82 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 298..326 8/28 (29%)
SOX-TCF_HMG-box 325..396 CDD:238684 64/70 (91%)
panNP_726528.2 SOX-TCF_HMG-box 713..784 CDD:238684 64/70 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 134 1.000 Domainoid score I4951
eggNOG 1 0.900 - - E1_KOG3248
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000839
OrthoInspector 1 1.000 - - otm25294
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10373
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.870

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