Protein Alignment pou3f2a and pdm2

DIOPT Version :10

• Sequence 1: NP_571364.1
• Gene: pou3f2a / 30547
• ZFINID: ZDB-GENE-980526-139
• Length: 337
• Species: Danio rerio
• Sequence 2: NP_723763.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Alignment Length: 264
• Identity: 124/264 - (46%)
• Similarity: 149/264 - (56%)
• Gaps: 38/264 - (14%)

Zfish    68 SPWPASPLGEQDIKPVEELQHSPRQAHLVPQSQHHETAAW-RATTTAHMPSMSTSNGQSLIYSQP 131
            :|...|||....:.||.  :||..|....|.|....:... .|..|.:.|||...........:|
  Fly   601 TPLAKSPLRSPSLSPVP--RHSKSQQRTPPNSMTANSLGMSSAVMTPNTPSMQQQPQLQQSTPKP 663

Zfish   132 GYGEMHHEEHHSPHLSEHGHPQSL-HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTL 195
            ..|           |:.......| .|.|:|...::||||||.||||||||||||.|||||:|.|
  Fly   664 TSG-----------LTVASAMAKLEQSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKL 717

Zfish   196 YGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADST------------------SGSPTSL 242
            |||.||||||.|||||.|||||||||||||.||||:||||                  |.:|.|:
  Fly   718 YGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESI 782

Zfish   243 DKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPGASEINSLADSLQLEKEVVRVWFCNRRQKEK 307
                 .||:||||||||.:|:..||..||...||.:.||:.|::.|.::|||:||||||||||||
  Fly   783 -----LGRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEK 842

Zfish   308 RMTP 311
            |:.|
  Fly   843 RINP 846

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pou3f2a	NP_571364.1	POU	159..233	CDD:197673	58/73 (79%)
		Homeodomain	252..308	CDD:459649	33/55 (60%)
pdm2	NP_723763.1	PHA03247	<375..675	CDD:223021	19/86 (22%)
		POU	691..755	CDD:197673	54/63 (86%)
		Homeodomain	787..843	CDD:459649	33/55 (60%)