Sequence 1: | NP_571362.2 | Gene: | sox17 / 30544 | ZFINID: | ZDB-GENE-991213-1 | Length: | 413 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_651839.1 | Gene: | Sox100B / 45039 | FlyBaseID: | FBgn0024288 | Length: | 529 | Species: | Drosophila melanogaster |
Alignment Length: | 456 | Identity: | 119/456 - (26%) |
---|---|---|---|
Similarity: | 173/456 - (37%) | Gaps: | 145/456 - (31%) |
- Green bases have known domain annotations that are detailed below.
Zfish 48 KCSAAGPGRGKSEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPMVDKRPF 112
Zfish 113 VEEAERLRVKHMQDHPNYKYRPRRRKQVKRNKRLEPSFP-----LPGMCDAKMTLCTEGMSAGYS 172
Zfish 173 GAGLPQYCENH---------------TLFESYSLPTPDPSPMDAGTTEFF---------AQLQDQ 213
Zfish 214 SAFSYHHQQEHHFQEQTNILNDTHCHGNTQTLKSRQS-------HSIAYSNINTNTNSN------ 265
Zfish 266 -LHAPI-NA---------------QLSSINLQQVFHENANPQISHHPG------THLNIFNRSPS 307
Zfish 308 SSSHHAMTPAYLNCPSTLDTFYNSSSQMKELSHCVSSHTHKQQSI--AEAQSQASTATHSSGQMV 370
Zfish 371 DEVEFEHCLSFGVP-------------------SAPLPGSDLISTVLSDASS----AVYY--CGY 410
Zfish 411 N 411 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sox17 | NP_571362.2 | SOX-TCF_HMG-box | 62..133 | CDD:238684 | 41/70 (59%) |
Sox_C_TAD | 186..411 | CDD:288887 | 55/296 (19%) | ||
Sox100B | NP_651839.1 | SOX-TCF_HMG-box | 76..146 | CDD:238684 | 40/69 (58%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |