Sequence 1: | NP_571362.2 | Gene: | sox17 / 30544 | ZFINID: | ZDB-GENE-991213-1 | Length: | 413 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523739.2 | Gene: | Sox15 / 36575 | FlyBaseID: | FBgn0005613 | Length: | 784 | Species: | Drosophila melanogaster |
Alignment Length: | 544 | Identity: | 152/544 - (27%) |
---|---|---|---|
Similarity: | 207/544 - (38%) | Gaps: | 185/544 - (34%) |
- Green bases have known domain annotations that are detailed below.
Zfish 1 MSSPDAGYSSDDPSQTSSCSS-----------------VMMPGMGQCPWVDPLSPL-SDSKSKHE 47
Zfish 48 KCSAAGPG----RGKSEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPMVD 108
Zfish 109 KRPFVEEAERLRVKHMQDHPNYKYRPRRRKQVK------RNKRLEPSFPLPGMCDAKMT--LCTE 165
Zfish 166 GMSAGYSGAGLP---QYC----ENH------TLFESYSLPTPDPSPMD----AGTTEFFAQL--- 210
Zfish 211 -------------------------------------QDQSAFSYHHQQ--EHHFQEQTNILNDT 236
Zfish 237 H-----------CHGNTQTLKSR----QSHSIA---YSNINTNTNSNLHAPINAQLSSINLQQVF 283
Zfish 284 HENANPQISHHPGTHLNIFNRSPSSS---------SHHAMTPAYLNCPSTLDTFYNSSS------ 333
Zfish 334 ---------------QMKELSHCVSSHTHKQQSIAEAQSQASTATHSSGQMVDEVEFEHCLSFGV 383
Zfish 384 PSAPLPGSDLISTVLSDASSAVYY 407 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sox17 | NP_571362.2 | SOX-TCF_HMG-box | 62..133 | CDD:238684 | 54/70 (77%) |
Sox_C_TAD | 186..411 | CDD:288887 | 59/316 (19%) | ||
Sox15 | NP_523739.2 | SOX-TCF_HMG-box | 214..285 | CDD:238684 | 54/70 (77%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 118 | 1.000 | Domainoid score | I5813 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 1 | 1.000 | - | - | otm24659 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R685 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.040 |