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Protein Alignment sox3 and cic
DIOPT Version :9
Sequence 1: | NP_001001811.2 |
Gene: | sox3 / 30529 |
ZFINID: | ZDB-GENE-980526-333 |
Length: | 300 |
Species: | Danio rerio |
Sequence 2: | NP_001262755.1 |
Gene: | cic / 53560 |
FlyBaseID: | FBgn0262582 |
Length: | 2150 |
Species: | Drosophila melanogaster |
Alignment Length: | 131 |
Identity: | 42/131 - (32%) |
Similarity: | 67/131 - (51%) |
Gaps: | 14/131 - (10%) |
- Green bases have known domain annotations that are detailed below.
Zfish 15 QSNTGSVTGGKNNSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLTDA 79
|...|:........|| .:::|||||||::|:..|:.:.:::|...|..:||.||..|..|...
Fly 1214 QQQAGAAGTAAGQPAN--KKIRRPMNAFMIFSKKHRKMVHKKHPNQDNRTVSKILGEWWYALKPE 1276
Zfish 80 EKRPFIDEAKRLRAMHMKEHPDYKY--RPRRKTKTLLKKDKYSLPGGLLAPGANAVNNA----VS 138
:|..:.:.|..::..|.|.||::|: :.|||:.| ..:.||| .|.||....:| ||
Fly 1277 QKAQYHELASSVKDAHFKLHPEWKWCSKDRRKSST-----STATPGG-KASGAAGTGDAKQRLVS 1335
Zfish 139 V 139
|
Fly 1336 V 1336
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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