DRSC/TRiP Functional Genomics Resources

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Protein Alignment tcf7l1a and Sox15

DIOPT Version :9

Sequence 1:NP_571344.1 Gene:tcf7l1a / 30523 ZFINID:ZDB-GENE-980605-30 Length:560 Species:Danio rerio
Sequence 2:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster


Alignment Length:462 Identity:97/462 - (20%)
Similarity:157/462 - (33%) Gaps:155/462 - (33%)


- Green bases have known domain annotations that are detailed below.


Zfish   165 QHPHHVHPLTPLITYSNEHFSPGTPPSHLSPEILDPKTGIPRTPHPSELSPYYPLSPGAVGQIPH 229
            :||||:     |..|:::.:                       ||.|. :|.|..|.|:  ..|.
  Fly     8 EHPHHL-----LTNYNSKKY-----------------------PHVSR-TPEYSHSTGS--DYPE 41

Zfish   230 PLGWLVPQQGQHMYSIPPG------GFRHPYPALAMNASMSS------LVSSRFSPHMVPHPPHG 282
            ..|:|...:..|..:...|      |..|..|:|...|..||      |..:..:.|...|.|..
  Fly    42 HGGYLTDGRLMHESNSDAGIYHVRQGSEHSSPSLHSPAIQSSGYENEHLNEAVLAAHSHSHSPMP 106

Zfish   283 LHQTGI--------------------------------PHPAIVSPAIKQ--EPNGESP------ 307
            :..:..                                ||..:|.....|  :....||      
  Fly   107 MVSSAYVGGGTASGSLINSNIPLLGGGGNSVLNKFLSHPHAGMVGGGTGQMEDCTSHSPIEAASM 171

Zfish   308 -SNSTHGKPSVP---------------------VKKEEEKKPHIKKPLNAFMLYMKEMRAKVVAE 350
             |....|....|                     .:.:..|:..|::|:||||::.|..|.|:..|
  Fly   172 WSYDYKGDLCAPNCGYLERHKPLPADLKYRPGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADE 236

Zfish   351 CTLKESAAINQILGRRWHSLSREEQAKYYELARKERQLHSQLYPGWSARDNYGKRKKRK-RDCKS 414
            .....:|.::::||::|.||:.:::..|.|.|.:.|.:|...:|.:..|..  :||:.| |..:.
  Fly   237 NPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYKYRPR--RRKQSKLRAMQP 299

Zfish   415 DSPSESNFSPQP--------KKQCVPYLSS----------EKMCDSPTSSHGSMLDSPATPSAAL 461
            ....:|..||.|        .|...|.|::          |..|:|...:||.     :||....
  Fly   300 GGKEQSESSPNPGTGGSKSNPKLATPPLATASSSYTTPTDESTCNSTNQNHGQ-----STPGGLY 359

Zfish   462 ASPAAPA-----------ATHSEQAQPLSLTTKPEGRAHHNHPHFPLPGKSSGSGSG--SSMALH 513
            ..|..|.           |..:||.:.|:....|           .|..:||.:|.|  :|:.|.
  Fly   360 EQPLKPTYSPSSVDCYSNADSTEQIESLAANCPP-----------ALLNESSPTGGGYDNSLLLK 413

Zfish   514 SLSRPIP 520
            .|::|.|
  Fly   414 KLTKPSP 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tcf7l1aNP_571344.1 CTNNB1_binding 1..233 CDD:285538 14/67 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..77
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..328 7/60 (12%)
SOX-TCF_HMG-box 328..399 CDD:238684 22/70 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..513 32/149 (21%)
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 22/70 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 58 1.000 Inparanoid score I5417
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.960

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