Protein Alignment nr6a1a and Hr39

DIOPT Version :9

• Sequence 1: NP_571331.2
• Gene: nr6a1a / 30506
• ZFINID: ZDB-GENE-991207-19
• Length: 477
• Species: Danio rerio
• Sequence 2: NP_476932.1
• Gene: Hr39 / 35398
• FlyBaseID: FBgn0261239
• Length: 808
• Species: Drosophila melanogaster
• Alignment Length: 433
• Identity: 126/433 - (29%)
• Similarity: 191/433 - (44%)
• Gaps: 65/433 - (15%)

Zfish    43 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCEMSRKQRNRCQYCRLLKCLQMG 107
            |.||||:.:|.||||.|||.|||||||::.|::.|.|.|...|::|...|.:|..||..||||.|
  Fly   376 CPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKG 440

Zfish   108 MNRKAIREDGMPGGR----------NKSIGPVQISDEEIERIMSGQEFKDEANMPEHTWGNNGDS 162
            |..:|||||...|||          |..:.|: :|.::.....:......:....:.....||
  Fly   441 MKLEAIREDRTRGGRSTYQCSYTLPNSMLSPL-LSPDQAAAAAAAAAVASQQQPHQRLHQLNG-- 502

Zfish   163 DHSSPGNGVSDGNQPSPVSTLSSNRSVELNGYTTALREQYIGNA------------MAQHYQFLP 215
                      .|..|.|.|| |...|..|.|  |:::.:.:...            :.|....:.
  Fly   503 ----------FGGVPIPCST-SLPASPSLAG--TSVKSEEMAETGKQSLRTGSVPPLLQEIMDVE 554

Zfish   216 HLFGYA-------AQPRSLY----PQSHTLIGQLVAAEDLAPLGTPMLIEDGY----RVTQVELF 265
            ||:.|.       .||.|.:    ..|.:..|....|.  |.|..|:|...|.    .....:|.
  Fly   555 HLWQYTDAELARINQPLSAFASGSSSSSSSSGTSSGAH--AQLTNPLLASAGLSSNGENANPDLI 617

Zfish   266 ALLCRLADELLFRQISWIKKLPFFCDLSIEDYTRLLSATWQELILLACLTVYSAQVLGDL-ANVT 329
            |.||.:||..|::.:.|.|.||.|.::||:|...||..:|.||:|.:| ...|....|:: .:..
  Fly   618 AHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSC-CFRSIDTPGEIKMSQG 681

Zfish   330 HKYTPSDDELHSFSEDGMEV-MEKLIYLFRKFHQLKVSNEEYACMKAINFLNQDIRGLTNVTQLE 393
            .|.|     |.....:|::. :|:::.|.....:|:|...||..||.|..|..|...|....::.
  Fly   682 RKIT-----LSQAKSNGLQTCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTTELQEAVKVR 741

Zfish   394 QLNKRYWYVCQDYTEYKYPHQPKRFPEIMMCLPEIR--CIAGK 434
            :..::.....|.||...||..|.:|.|:::.:|:::  |..||
  Fly   742 ECQEKALQSLQAYTLAHYPDTPSKFGELLLRIPDLQRTCQLGK 784

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nr6a1a	NP_571331.2	NR_DBD_GCNF_like	36..124	CDD:143543	44/90 (49%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	147..187		8/39 (21%)
		NR_LBD_DHR4_like	237..449	CDD:132751	58/206 (28%)
Hr39	NP_476932.1	NR_DBD_Lrh-1_like	376..468	CDD:143541	45/91 (49%)
		NR_LBD_F2	617..779	CDD:132728	48/167 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D278717at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.920