DRSC/TRiP Functional Genomics Resources

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Protein Alignment Igsf9 and DIP-delta

DIOPT Version :9

Sequence 1:NP_001100667.1 Gene:Igsf9 / 304982 RGDID:1304566 Length:1179 Species:Rattus norvegicus
Sequence 2:NP_001097508.2 Gene:DIP-delta / 5740816 FlyBaseID:FBgn0085420 Length:469 Species:Drosophila melanogaster


Alignment Length:431 Identity:96/431 - (22%)
Similarity:168/431 - (38%) Gaps:63/431 - (14%)


- Green bases have known domain annotations that are detailed below.


  Rat    24 PEVVSVVGRAGESAVLGCDLLPPAGRPPLHVIEWLRFGFLLPIFIQFGLYS--PRIDPDYVGRVR 86
            |.|...|||   .|.|.|.:....|    :.:.|:.....:.:.|...:.|  ||....|.....
  Fly    51 PNVTVAVGR---DANLPCVVEHLGG----YKVAWIHIDRQMILTIHRHVISRIPRYSITYTDNTW 108

  Rat    87 LQTGASLQIEGLRVEDQGWYECRVLFLDQHSPEQDFANGSWVHLTVNSPPQFQ--ETPPLVLEVK 149
            |     |.:.....:|:|:|.|:|    ..:|......    :|.|..||...  |:.|..:.|:
  Fly   109 L-----LHVNQAHQDDRGYYMCQV----NTNPMISQVG----YLQVVVPPNILDIESTPSSVAVR 160

  Rat   150 ELEAVTLRCVALGSPQPYVTWKFR-GQDLG-KGQGQVQVRNG-TLWIRRVERGSAGDYTCQASST 211
            |.:.:.:.|.|.|.|.|.:.|:.. |:::. :.:.:|.|.:. .|.:.:|.|...|.|.|.|  |
  Fly   161 ENQNINMTCRADGFPAPKIIWRREDGEEIAVEKKKKVLVYDADVLPLTKVSRNEMGAYLCIA--T 223

  Rat   212 EGSVTHTTQLLVLG---PPVIVVPPNNNTVNA--SQDVSLACRAEAYPANLTYSWFQDRINVFHI 271
            .|.....::.::|.   .|:|.||  |..|.|  ..||::.|..||:|..:.| |..:.:.|...
  Fly   224 NGVPPSVSKRIILDVEFSPMIWVP--NQLVGAPSGTDVTIDCHTEAHPKAIIY-WVYNSVMVLPS 285

  Rat   272 SRLQS-------RVRILVDGSLWLQATQPDDAGHYTCVPSNGFPHPPSASAYLTVLYPAQVTVMP 329
            .:.::       |..:    .|.::..|..|.|:|.|:..|.......:.....:..|:..:...
  Fly   286 KKYKTDYTENSYRAHM----KLTIRNLQYGDFGNYRCISKNSLGETEGSIRVYEIPLPSTPSKQV 346

  Rat   330 PETPLPIGMRGVIRCPVRANPPLLFVTWTKDGQALQLDKFPG-WSLGPEGSLVIALGNEDAL--- 390
            ..|.:......:|  |...|.....:. |..|.|::.|.:|| .|....|....|..:..::   
  Fly   347 THTTVESRENNII--PSSRNDTTKSLQ-TDVGYAMKNDLYPGSASSSSSGGSSSAASSSSSMQTS 408

  Rat   391 ---GEYSCTPYNSLGTAGSSPVTRVLLKAPPAFIDQPKEEY 428
               |..:....:|:|:.||..:.:...     :.::|..||
  Fly   409 ALPGGVAGNSLSSMGSKGSLAIGKSTF-----YTERPPNEY 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Igsf9NP_001100667.1 IG 28..110 CDD:214652 19/83 (23%)
Ig strand A 136..139 CDD:409353 1/2 (50%)
IG_like 143..223 CDD:214653 21/82 (26%)
Ig strand A' 145..148 CDD:409353 0/2 (0%)
Ig strand B 154..161 CDD:409353 1/6 (17%)
Ig strand C 167..172 CDD:409353 1/4 (25%)
Ig strand C' 175..177 CDD:409353 0/1 (0%)
Ig strand D 183..187 CDD:409353 1/3 (33%)
Ig strand E 189..193 CDD:409353 1/4 (25%)
Ig strand F 202..210 CDD:409353 4/7 (57%)
Ig strand G 213..223 CDD:409353 1/9 (11%)
Ig_3 226..305 CDD:404760 23/87 (26%)
putative Ig strand A 226..230 CDD:409353 1/3 (33%)
putative Ig strand A' 235..239 CDD:409353 1/3 (33%)
putative Ig strand B 241..251 CDD:409353 3/9 (33%)
putative Ig strand C' 267..270 CDD:409353 1/2 (50%)
putative Ig strand D 279..282 CDD:409353 0/2 (0%)
putative Ig strand E 284..290 CDD:409353 1/5 (20%)
putative Ig strand F 297..305 CDD:409353 3/7 (43%)
putative Ig strand G 310..319 CDD:409353 0/8 (0%)
Ig 322..407 CDD:416386 18/91 (20%)
Ig strand A' 324..328 CDD:409353 0/3 (0%)
Ig strand B 333..347 CDD:409353 2/13 (15%)
Ig strand C 353..359 CDD:409353 0/5 (0%)
Ig strand C' 362..364 CDD:409353 0/1 (0%)
Ig strand D 371..374 CDD:409353 1/3 (33%)
Ig strand E 378..382 CDD:409353 1/3 (33%)
Ig strand F 391..399 CDD:409353 1/7 (14%)
Ig 418..503 CDD:416386 3/11 (27%)
Ig strand A 418..421 CDD:409353 0/2 (0%)
Ig strand A' 427..430 CDD:409353 2/2 (100%)
Ig strand B 436..443 CDD:409353
Ig strand C 449..454 CDD:409353
Ig strand C' 457..459 CDD:409353
Ig strand D 462..466 CDD:409353
Ig strand E 469..473 CDD:409353
Ig strand F 482..490 CDD:409353
Ig strand G 493..503 CDD:409353
FN3 508..599 CDD:238020
FN3 625..715 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 766..807
PHA03247 <777..1062 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 819..846
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 869..895
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 942..979
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1016..1079
PDZ-binding. /evidence=ECO:0000250 1177..1179
DIP-deltaNP_001097508.2 IG 51..143 CDD:214652 25/111 (23%)
Ig 145..238 CDD:416386 24/94 (26%)
Ig strand A 145..149 CDD:409353 1/3 (33%)
Ig strand A' 154..159 CDD:409353 1/4 (25%)
Ig strand B 165..172 CDD:409353 1/6 (17%)
Ig strand C 178..183 CDD:409353 1/4 (25%)
Ig strand C' 185..187 CDD:409353 0/1 (0%)
Ig strand D 195..199 CDD:409353 1/3 (33%)
Ig strand E 203..209 CDD:409353 1/5 (20%)
Ig strand F 216..223 CDD:409353 4/8 (50%)
Ig strand G 230..238 CDD:409353 1/7 (14%)
Ig 242..333 CDD:416386 24/97 (25%)
Ig strand A' 250..253 CDD:409353 1/2 (50%)
Ig strand B 259..266 CDD:409353 2/6 (33%)
Ig strand C 272..277 CDD:409353 2/5 (40%)
Ig strand C' 281..283 CDD:409353 0/1 (0%)
Ig strand D 289..293 CDD:409353 0/3 (0%)
Ig strand E 295..305 CDD:409353 2/13 (15%)
Ig strand F 314..322 CDD:409353 3/7 (43%)
Ig strand G 325..334 CDD:409353 0/8 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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