Sequence 1: | NP_001100659.2 | Gene: | Tnn / 304913 | RGDID: | 1306002 | Length: | 1562 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001245581.1 | Gene: | Nrg / 31792 | FlyBaseID: | FBgn0264975 | Length: | 1309 | Species: | Drosophila melanogaster |
Alignment Length: | 939 | Identity: | 178/939 - (18%) |
---|---|---|---|
Similarity: | 323/939 - (34%) | Gaps: | 247/939 - (26%) |
- Green bases have known domain annotations that are detailed below.
Rat 293 LSYYPLGK--EQATKQVRVPKEQHTYDITGLLPGT--KYIVTLRN----VKKDISSSPQHLLATT 349
Rat 350 DLAVVGTAWVNEETETSLDVEWENPLTEVDYYKLRYGPLTGQEVT-EVTVPKSRDPKSRY-DITG 412
Rat 413 LQPGTEYKITVVPIRGDLEGKPILLN-------------GRTEIDG-------------PTNVVT 451
Rat 452 ----------NQVTEDTASVSWDPVRADIDKYVVRYISHDGETKE-KAVPK-----DQSSTVLTG 500
Rat 501 LKPGEAYKVFVWAERGNQGSKKADTKALTEIDSPENLVTDRVTENSLSVSWD-------PVEAEI 558
Rat 559 DRYVVSYT--SVDGETKQVPVRKDQSSTVLTGLSPGVEYKVYV------WAEKGDRESKKANTKA 615
Rat 616 PTDIDSPKNLVTDQVTENTLSVSWDP---VQANID--RYMVSYTSADGETREVPVPK-------- 667
Rat 668 -EKSSTVLTGLRPGMEYKVHVWAQKGTQESRKANTKA------PTDIDGPKNLVTDQVTETTLS- 724
Rat 725 VSWDPVEADIDR-----YMVR-YTSPDGE--TKEVPVSKDKSSTVLRGLRPGVEYKVDVWAQKG- 780
Rat 781 --AQDSRKANTKAPTDIDSP-KNLVTEQVTESTATVSW-DPV--EADIDRYVVRYTSVD----GE 835
Rat 836 TREF---LVGKDQTSTILTGMKPGVEYQVDVWAQKGTRES-----RKTSTKAPTDIDGPKNLVTD 892
Rat 893 QVTETTLSVSWDPVEAD--IDRYMVRYTSP---------------DGETKEVPVSKDKSSTV--L 938
Rat 939 RGLRPGVEYKVDVWAQKGAQDSRKANTKAPTD-IDSPKNLAINQVTETTLSVSWD-----PVQAD 997
Rat 998 IDRYVV-------RYTSADGESKEFLIGKEQ--------------------RSTVLTGLRPGVEY 1035
Rat 1036 KVEVWAQKG----------ARESKKANTK 1054 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Tnn | NP_001100659.2 | EGF_2 | <142..166 | CDD:285248 | |
EGF_2 | 169..197 | CDD:285248 | |||
EB | 181..233 | CDD:279949 | |||
EGF_2 | 233..259 | CDD:285248 | |||
fn3 | 264..332 | CDD:278470 | 12/42 (29%) | ||
fn3 | 359..434 | CDD:278470 | 18/76 (24%) | ||
fn3 | 444..521 | CDD:278470 | 18/105 (17%) | ||
FN3 | 532..608 | CDD:214495 | 15/90 (17%) | ||
FN3 | 620..696 | CDD:214495 | 18/89 (20%) | ||
fn3 | 708..785 | CDD:278470 | 20/88 (23%) | ||
fn3 | 796..875 | CDD:278470 | 20/94 (21%) | ||
fn3 | 884..961 | CDD:278470 | 17/95 (18%) | ||
fn3 | 972..1049 | CDD:278470 | 20/118 (17%) | ||
FN3 | 1060..1136 | CDD:214495 | |||
FN3 | 1148..1224 | CDD:214495 | |||
fn3 | 1236..1313 | CDD:278470 | |||
FReD | 1327..1540 | CDD:238040 | |||
Nrg | NP_001245581.1 | Ig | 55..128 | CDD:299845 | |
IG_like | 57..127 | CDD:214653 | |||
Ig | 135..214 | CDD:299845 | |||
IG_like | 141..216 | CDD:214653 | |||
ig | 251..332 | CDD:278476 | |||
I-set | 339..427 | CDD:254352 | 16/75 (21%) | ||
Ig | 354..427 | CDD:299845 | 16/75 (21%) | ||
I-set | 432..517 | CDD:254352 | 19/97 (20%) | ||
Ig | 446..517 | CDD:299845 | 16/73 (22%) | ||
I-set | 522..611 | CDD:254352 | 17/102 (17%) | ||
ig | 525..609 | CDD:278476 | 17/96 (18%) | ||
FN3 | 613..707 | CDD:238020 | 16/96 (17%) | ||
FN3 | 716..807 | CDD:238020 | 21/96 (22%) | ||
fn3 | 817..905 | CDD:278470 | 20/87 (23%) | ||
FN3 | 917..1004 | CDD:238020 | 19/86 (22%) | ||
FN3 | 1041..1111 | CDD:238020 | 12/69 (17%) | ||
Bravo_FIGEY | 1155..>1221 | CDD:290593 | 12/65 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |